Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02279 and RBAM_013320

See DNA alignment / Visit BSNT_02279 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:58
# Commandline: needle
#    -asequence pep-align/BSNT_02279___ogt.1.9828.seq
#    -bsequence pep-align/RBAM_013320___ogt.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02279___ogt-RBAM_013320___ogt.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02279___ogt-RBAM_013320___ogt.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02279___ogt
# 2: RBAM_013320___ogt
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 165
# Identity:     107/165 (64.8%)
# Similarity:   130/165 (78.8%)
# Gaps:           0/165 ( 0.0%)
# Score: 564.0
# 
#
#=======================================

BSNT_02279___      1 MNYYTTAETPLGELIIAEEEDRITRLFLSQEDWVDWKETVQNTEHKETPN     50
                     |..:|:.:.|.|.:|:.|||..||.|||:.||:.:|::.....:..||..
RBAM_013320__      1 MICFTSVKAPFGTVIVTEEESFITGLFLTGEDFEEWRKGAPGVKPCETAL     50

BSNT_02279___     51 LAEAKQQLQEYFAGERKTFSLPLSQKGTPFQQKVWQALERIPYGESRSYA    100
                     |:||||||..||:||||.|||||.|||||||::||.||..|||||||||.
RBAM_013320__     51 LSEAKQQLASYFSGERKQFSLPLRQKGTPFQERVWNALTMIPYGESRSYG    100

BSNT_02279___    101 DIAAAVGSPKAVRAVGQANKRNDLPIFVPCHRVIGKNSALTGYAGSKTEI    150
                     |:|.|:|.||||||:|||.|||.|||.:|||||||||||||||||:||::
RBAM_013320__    101 DMAEAIGKPKAVRAIGQAKKRNRLPILIPCHRVIGKNSALTGYAGTKTDV    150

BSNT_02279___    151 KAFLLNIERISYKEK    165
                     ||.|||||:||||||
RBAM_013320__    151 KAVLLNIEQISYKEK    165


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