Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02279 and RBAM_013320
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:58
# Commandline: needle
# -asequence dna-align/BSNT_02279___ogt.1.9828.seq
# -bsequence dna-align/RBAM_013320___ogt.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02279___ogt-RBAM_013320___ogt.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02279___ogt-RBAM_013320___ogt.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02279___ogt
# 2: RBAM_013320___ogt
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 523
# Identity: 359/523 (68.6%)
# Similarity: 359/523 (68.6%)
# Gaps: 50/523 ( 9.6%)
# Score: 1200.0
#
#
#=======================================
BSNT_02279___ 1 ATGAACTACTATAC------GACAGCCGAGACGCCGCTCGGTGAAC--TT 42
||||.||..|.||| ||.|| |||||.|.| |||| |.
RBAM_013320__ 1 ATGATCTGTTTTACAAGTGTGAAAG------CGCCGTTTG--GAACCGTC 42
BSNT_02279___ 43 ATCATTGCCGAAGAGGAGGACCGGATCACTCGTCTATTTCTCAGTCAGGA 92
|||.|..|.||.||.|||..|...||.||..|.||.|||||||....|||
RBAM_013320__ 43 ATCGTAACAGAGGAAGAGAGCTTTATTACCGGCCTGTTTCTCACCGGGGA 92
BSNT_02279___ 93 AGATTGGGTGGATT---GGAAAGAAACG------GTTCAGAATACTGAGC 133
|||||..|.|||.| ||||||...|| || ||..|.|.||
RBAM_013320__ 93 AGATTTTGAGGAATGGCGGAAAGGCGCGCCCGGCGT----AAAGCCGTGC 138
BSNT_02279___ 134 ACAAGGAAACACCTAATCTTG----CAGAAGCGAAACAACAGCT----TC 175
|||||..|| ||| |.||.||||||||.||||| ||
RBAM_013320__ 139 -----GAAACCGCT----TTGCTGTCGGAGGCGAAACAGCAGCTGGCATC 179
BSNT_02279___ 176 AAGAATATTTCGCAGGCGAAAGGAAGACATTCTCCCTGCCGCTCAGCCAA 225
||||||..||||.|||||.|||..||||||.|||||.||.||.|||
RBAM_013320__ 180 ----ATATTTTTCAGGAGAAAGAAAGCAATTCTCTCTGCCTCTGAGACAA 225
BSNT_02279___ 226 AAGGGCACTCCTTTTCAGCAAAAAGTGTGGCAGGCGCTGGAGAGGATTCC 275
||.|||||.||.||||||.|||.|||.|||.|.||||||..||.||||||
RBAM_013320__ 226 AAAGGCACACCCTTTCAGGAAAGAGTATGGAACGCGCTGACGATGATTCC 275
BSNT_02279___ 276 ATATGGCGAATCCCGAAGCTATGCGGATATTGCCGCTGCGGTCGGCAGTC 325
.|||||.||||||||||||||.|..|||||.||.|..|||.||||.|..|
RBAM_013320__ 276 TTATGGGGAATCCCGAAGCTACGGCGATATGGCTGAAGCGATCGGAAAAC 325
BSNT_02279___ 326 CGAAAGCGGTGCGCGCTGTCGGGCAGGCTAATAAACGTAACGACCTGCCG 375
||||||||||||||||..||||.||.||.||.|||||.|||...||||||
RBAM_013320__ 326 CGAAAGCGGTGCGCGCCATCGGACAAGCCAAAAAACGAAACCGGCTGCCG 375
BSNT_02279___ 376 ATTTTTGTCCCGTGCCACAGAGTGATCGGCAAAAACAGTGCGTTAACAGG 425
|||||..||||.|||||..|.||.||||||||||||||.||.|||||.||
RBAM_013320__ 376 ATTTTGATCCCTTGCCATCGGGTAATCGGCAAAAACAGCGCCTTAACGGG 425
BSNT_02279___ 426 ATACGCCGGAAGCAAAACGGAGATCAAAGCATTTTTGCTAAACATCGAGC 475
||||||.||.|..||.|||||..|.|||||..|..||||.||||||||.|
RBAM_013320__ 426 ATACGCGGGCACGAAGACGGATGTAAAAGCGGTGCTGCTGAACATCGAAC 475
BSNT_02279___ 476 GAATCTCCTATAAAGAAAAATAA 498
.|||.||||||||||||||||||
RBAM_013320__ 476 AAATATCCTATAAAGAAAAATAA 498
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