Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02276 and RBAM_013300
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:57
# Commandline: needle
# -asequence pep-align/BSNT_02276___ykrP.1.9828.seq
# -bsequence pep-align/RBAM_013300___ykrP.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02276___ykrP-RBAM_013300___ykrP.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02276___ykrP-RBAM_013300___ykrP.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02276___ykrP
# 2: RBAM_013300___ykrP
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 340
# Identity: 283/340 (83.2%)
# Similarity: 312/340 (91.8%)
# Gaps: 0/340 ( 0.0%)
# Score: 1497.0
#
#
#=======================================
BSNT_02276___ 1 MSKSRDSYFDNAKFLLIFLVVFGHILRSFINDNHFMLYLYKFIYTFHMPA 50
|:||||||||||||:||||||||||||||||.|.|||:||||||||||||
RBAM_013300__ 1 MTKSRDSYFDNAKFILIFLVVFGHILRSFINGNEFMLHLYKFIYTFHMPA 50
BSNT_02276___ 51 FILVSGYFAKGFKRAGYVKKLAVKLIIPYLIFQIIYSVFYYIMQDESMAN 100
||||||||||.|||.||||||||||||||||||.|||||||::||||||:
RBAM_013300__ 51 FILVSGYFAKNFKRKGYVKKLAVKLIIPYLIFQGIYSVFYYLIQDESMAS 100
BSNT_02276___ 101 VNPIDPQWSLWFLVSLFFWNLLLYPFSKVSKQWALFVSCGIAVLIGYLDF 150
||||||||||||||||||||||||||:|:.|.|||..|||:||:||||||
RBAM_013300__ 101 VNPIDPQWSLWFLVSLFFWNLLLYPFTKLPKMWALGASCGLAVMIGYLDF 150
BSNT_02276___ 151 VSSTLSLSRTFVFLPMFLVGFYLNKHHFDLLRSKRGKQIALGVLAAVFVI 200
:||||||||||||||||||||||.|.||||||:|||:|||.|||..||::
RBAM_013300__ 151 ISSTLSLSRTFVFLPMFLVGFYLKKQHFDLLRAKRGRQIAAGVLGIVFLL 200
BSNT_02276___ 201 CWGIDFDYSFLFGSKPYSSFGDVTLVSGLSRIGWYVLAFGATFSFLALVP 250
||.||||||:||||:|||:||.|:|:||||||.||||||.||||||||||
RBAM_013300__ 201 CWCIDFDYSWLFGSEPYSTFGTVSLLSGLSRICWYVLAFAATFSFLALVP 250
BSNT_02276___ 251 QKRYFFTKWGTRTFYVYLLHGFIIKTLRQVGLEDWLTDYQSLVILLLLTA 300
|||||||||||||||||||||||||||||:||||.|:|||:||:||:|||
RBAM_013300__ 251 QKRYFFTKWGTRTFYVYLLHGFIIKTLRQIGLEDHLSDYQNLVMLLILTA 300
BSNT_02276___ 301 ALTSVLSSNFVKTVAQPFIELRMTSLLQFVRGTGKNAYLK 340
||||:||||.|||.||||||||:|..|:.|:||...||.|
RBAM_013300__ 301 ALTSILSSNAVKTAAQPFIELRITGWLEAVKGTRNGAYSK 340
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