Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02275 and RBAM_013290

See DNA alignment / Visit BSNT_02275 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:57
# Commandline: needle
#    -asequence pep-align/BSNT_02275___ykzE.1.9828.seq
#    -bsequence pep-align/RBAM_013290___ykzE.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02275___ykzE-RBAM_013290___ykzE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02275___ykzE-RBAM_013290___ykzE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02275___ykzE
# 2: RBAM_013290___ykzE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 59
# Identity:      44/59 (74.6%)
# Similarity:    49/59 (83.1%)
# Gaps:           4/59 ( 6.8%)
# Score: 221.0
# 
#
#=======================================

BSNT_02275___      1 -MKKNRHSRDMQNHKKPMNKKVLEEEFSSELGDYNAGKIIETLEVTKPEK     49
                      .||||||:|||||||||:.|:|||||:||||||||||.|||||.||| |
RBAM_013290__      1 MTKKNRHSKDMQNHKKPMDPKLLEEEFASELGDYNAGKWIETLEQTKP-K     49

BSNT_02275___     50 KKEKNKKQK     58
                     |||..|:  
RBAM_013290__     50 KKEDGKQ--     56


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