Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02275 and RBAM_013290
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:57
# Commandline: needle
# -asequence dna-align/BSNT_02275___ykzE.1.9828.seq
# -bsequence dna-align/RBAM_013290___ykzE.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02275___ykzE-RBAM_013290___ykzE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02275___ykzE-RBAM_013290___ykzE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02275___ykzE
# 2: RBAM_013290___ykzE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 188
# Identity: 130/188 (69.1%)
# Similarity: 130/188 (69.1%)
# Gaps: 28/188 (14.9%)
# Score: 465.5
#
#
#=======================================
BSNT_02275___ 1 ---GTGAAGAAAAACCGTCATAGCAGAGACATGCAAAATCATAAAAAGCC 47
..|||.||||||||.||.||||.||||||||||||.|||||||||||
RBAM_013290__ 1 ATGACGAAAAAAAACCGCCACAGCAAAGACATGCAAAACCATAAAAAGCC 50
BSNT_02275___ 48 TATGAA---TAAAAAGGTGCTGGAGGAAGAGTTCTCAAGTGAACTTGGGG 94
.|||.| |||| .||||.||.||||||||..||||.||.||.||.|
RBAM_013290__ 51 GATGGACCCTAAA---TTGCTTGAAGAAGAGTTTGCAAGCGAGCTCGGTG 97
BSNT_02275___ 95 ATTACAATGCCGGGAAGAT-CATCGAAACGCTGGAAGTCACCAAGCCTGA 143
||||.||.||| ||||.|| .||.||||||||.|||...||.|||||
RBAM_013290__ 98 ATTATAACGCC-GGAAAATGGATTGAAACGCTTGAACAGACGAAGCC--- 143
BSNT_02275___ 144 AAAGAAAAAAGAAAA----AAACAAAAAACAAAAATAA 177
|||||||||||||.| ||||||.||
RBAM_013290__ 144 AAAGAAAAAAGAAGACGGCAAACAATAA---------- 171
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