Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02270 and RBAM_013270
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:57
# Commandline: needle
# -asequence pep-align/BSNT_02270___ykrM.1.9828.seq
# -bsequence pep-align/RBAM_013270___ykrM.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02270___ykrM-RBAM_013270___ykrM.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02270___ykrM-RBAM_013270___ykrM.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02270___ykrM
# 2: RBAM_013270___ykrM
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 450
# Identity: 399/450 (88.7%)
# Similarity: 424/450 (94.2%)
# Gaps: 1/450 ( 0.2%)
# Score: 2021.0
#
#
#=======================================
BSNT_02270___ 1 MRLKFGKLIQALSPAQLIALYYFLAVTVAVILLSLPAAHKPGADWTFIDA 50
|:||..|.||.||||||||||||||||||.||||||||||.||.|:||||
RBAM_013270__ 1 MKLKLKKFIQILSPAQLIALYYFLAVTVAFILLSLPAAHKQGASWSFIDA 50
BSNT_02270___ 51 LFTAVSSVSVTGLTVVDTADTFSTIGIFILAFVLQFGGIGIMTLGTFIWL 100
||||||||||||||||:|||||||.||.|||||||||||||||||||:||
RBAM_013270__ 51 LFTAVSSVSVTGLTVVNTADTFSTAGIVILAFVLQFGGIGIMTLGTFVWL 100
BSNT_02270___ 101 IMGKRIGLKERKLIMVDQNQSQFSGIVNLMKQVLFLILWIEFFGGLILGT 150
||||||||:|||||||||||||||||||||||||||||.|||.||:||||
RBAM_013270__ 101 IMGKRIGLRERKLIMVDQNQSQFSGIVNLMKQVLFLILLIEFLGGIILGT 150
BSNT_02270___ 151 YFLTYYDSYQEAYLHGFFASISATTNGGFDITGNSMIPFRHDYFVQFITM 200
||||||||:::|||||||||:||||||||||||||::|||||||||||||
RBAM_013270__ 151 YFLTYYDSFEQAYLHGFFASVSATTNGGFDITGNSLVPFRHDYFVQFITM 200
BSNT_02270___ 201 LLIIFGAIGFPVLVEVKDFLFSKHRRYPFTLFTKITTITFGSLVLFGAIG 250
|||||||||||||||||||||||.|||.|||||||||:|||.||||||:|
RBAM_013270__ 201 LLIIFGAIGFPVLVEVKDFLFSKQRRYSFTLFTKITTVTFGMLVLFGAVG 250
BSNT_02270___ 251 IFALEANHAFAGKSWHDILFLSLFQSTATRSGGLATIDISQLSDSTLFFI 300
|:||||:|...||||||:|||.|||||||||||||||||||||..|||||
RBAM_013270__ 251 IYALEASHVMKGKSWHDVLFLCLFQSTATRSGGLATIDISQLSAPTLFFI 300
BSNT_02270___ 301 CALMFIGASPSSVGGGIRTTTFALNLLALFHFARGNKAVKVFKRELHPAD 350
|||||||||||||||||||||||||||||||||||||||||||||||.||
RBAM_013270__ 301 CALMFIGASPSSVGGGIRTTTFALNLLALFHFARGNKAVKVFKRELHQAD 350
BSNT_02270___ 351 LMKSLVVTMMAILLVFGATLILTITEKH-SLLELLFEVCSAFGTTGLSLG 399
:||||||||||||||||:||||::|||: :||.|||||||||||||||||
RBAM_013270__ 351 VMKSLVVTMMAILLVFGSTLILSVTEKNQTLLGLLFEVCSAFGTTGLSLG 400
BSNT_02270___ 400 ITADLSSVGKCVIMIVMFIGRIGILTFLYLIGRKEIEANYHYPKERVIIG 449
||..||.:||||||||||||||||||||||||||||||||||||||:|||
RBAM_013270__ 401 ITPHLSDIGKCVIMIVMFIGRIGILTFLYLIGRKEIEANYHYPKERMIIG 450
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