Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02268 and RBAM_013250

See DNA alignment / Visit BSNT_02268 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:57
# Commandline: needle
#    -asequence pep-align/BSNT_02268___ykrK.1.9828.seq
#    -bsequence pep-align/RBAM_013250___ykrK.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02268___ykrK-RBAM_013250___ykrK.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02268___ykrK-RBAM_013250___ykrK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02268___ykrK
# 2: RBAM_013250___ykrK
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 233
# Identity:     173/233 (74.2%)
# Similarity:   208/233 (89.3%)
# Gaps:           0/233 ( 0.0%)
# Score: 913.0
# 
#
#=======================================

BSNT_02268___      1 MNIFKLSRTDMVRLLYSLKGQGEHSPLDILVQSANMSAEKAANHLEIPEF     50
                     ||.|||:|||||||||:|||||:.:||.||:|||:|:.::|.:.|.||||
RBAM_013250__      1 MNTFKLTRTDMVRLLYALKGQGDATPLQILLQSADMTLDEAESRLHIPEF     50

BSNT_02268___     51 LTRYERKKQKKEYGLSTNEIVELGNLCELTSLKSTAIQNWVKRDIKDLIG    100
                     |||:||||:|||||||||||||||||||||||||||:|||||||||||||
RBAM_013250__     51 LTRFERKKEKKEYGLSTNEIVELGNLCELTSLKSTAVQNWVKRDIKDLIG    100

BSNT_02268___    101 HPELGKKYSIEQAVILLIVRDLKSIYDFEHIRAILKVAFNTISDRSDDVI    150
                     ||.|||||:|||||||||||||||||||||||.|||:|||||:|||||||
RBAM_013250__    101 HPLLGKKYTIEQAVILLIVRDLKSIYDFEHIRGILKIAFNTITDRSDDVI    150

BSNT_02268___    151 SPIAYYESCAYVLDAIHHQDTPSMKESNLQEIAEQETERLRHRFEELNDS    200
                     |||:||||||.|:|.:||:..|.|||::|||:.|::|::|:..|:||...
RBAM_013250__    151 SPISYYESCAQVIDYLHHKANPPMKETSLQELVEEQTDKLKGCFKELGSG    200

BSNT_02268___    201 QWLKIRQIIAITVLSILTFHIQATAHKMTADIL    233
                     ||..||.|||:||||:|||||||:|:||.:.:|
RBAM_013250__    201 QWNNIRSIIAVTVLSVLTFHIQASAYKMISHLL    233


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