Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02265 and RBAM_013230
See
DNA alignment /
Visit
BSNT_02265 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:57
# Commandline: needle
# -asequence pep-align/BSNT_02265___ykrI.1.9828.seq
# -bsequence pep-align/RBAM_013230___ykrI.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02265___ykrI-RBAM_013230___ykrI.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02265___ykrI-RBAM_013230___ykrI.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02265___ykrI
# 2: RBAM_013230___ykrI
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 394
# Identity: 228/394 (57.9%)
# Similarity: 287/394 (72.8%)
# Gaps: 18/394 ( 4.6%)
# Score: 1140.5
#
#
#=======================================
BSNT_02265___ 1 MRRGIIVEKNKKFVTLLTPDGQFLKAKNDRHSYEIGEEIMLPSETRMGRR 50
|||||||||||||||||||||||||.|||..:.||||||....|||||||
RBAM_013230__ 1 MRRGIIVEKNKKFVTLLTPDGQFLKTKNDHRTCEIGEEITFEGETRMGRR 50
BSNT_02265___ 51 ASFFDFFKLRPFKMGIFTMTAIMLFIFIVLPVFSNNKAYAYMTIDINPSV 100
||||||.||||||:|:||||||:|||.|:|||||:||||||||:|||||:
RBAM_013230__ 51 ASFFDFLKLRPFKLGVFTMTAIILFILILLPVFSDNKAYAYMTLDINPSI 100
BSNT_02265___ 101 EMALNSDYEVIELTPLNDEGQKVVNDIDDWEKTDFKKVIDDIITDCSEHG 150
||||||.||||||||||.:.::|::||.||:.:|||:||.:||||||:||
RBAM_013230__ 101 EMALNSKYEVIELTPLNHDAKQVISDIGDWKSSDFKEVISNIITDCSKHG 150
BSNT_02265___ 151 YVKKSKEILISTVYENTEDNTYKKAVKKQLNDVTEKYKTTYRMESLESDM 200
|||:|||||||||||||:||||||.|||||.|:|||||.||:::||||||
RBAM_013230__ 151 YVKESKEILISTVYENTDDNTYKKGVKKQLADMTEKYKGTYQVQSLESDM 200
BSNT_02265___ 201 QTREKAKKEGVSTGSYIKSNEKNDNKDIKDDSSKPSGEE-DQKSDENEDE 249
:||||||:||:||||||:.|||...: |....:..|.| |||..|.:.:
RBAM_013230__ 201 ETREKAKQEGMSTGSYIRRNEKKTEE--KQPEKQTDGNETDQKDTETDAD 248
BSNT_02265___ 250 NTDQTDTQ----DSKQGDNEQL------NDADSGDQKEEKADDQIDDSDK 289
.::|.||: |.|...:|:. |:..:...:|.|.|.|..:...
RBAM_013230__ 249 QSEQPDTEKPAADEKTAPDEEKAAEKPGNNETTPGTEEAKPDSQDGNQQT 298
BSNT_02265___ 290 DKKIKE-SDENTNTEKDGDHEQTPIQDPQDKGNENNGADKGQSQYHRDWN 338
:|.... |:|||..|:||:.||.|.|:||:.||:. :..|..|:..||
RBAM_013230__ 299 EKNAASGSEENTQKEQDGETEQPPTQNPQENGNDK---EPKQKYYNHYWN 345
BSNT_02265___ 339 NGEQGKNRSSSRRDNASDRRNPNGY-SSDNNSAQNEDSPSAPGE 381
:.......|....:::||||||||| ....|:.:.::||.:|||
RBAM_013230__ 346 HDRNEHWESYRHHEDSSDRRNPNGYRHGKENADKYQNSPRSPGE 389
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.