Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02265 and RBAM_013230

See DNA alignment / Visit BSNT_02265 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:57
# Commandline: needle
#    -asequence pep-align/BSNT_02265___ykrI.1.9828.seq
#    -bsequence pep-align/RBAM_013230___ykrI.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02265___ykrI-RBAM_013230___ykrI.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02265___ykrI-RBAM_013230___ykrI.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02265___ykrI
# 2: RBAM_013230___ykrI
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 394
# Identity:     228/394 (57.9%)
# Similarity:   287/394 (72.8%)
# Gaps:          18/394 ( 4.6%)
# Score: 1140.5
# 
#
#=======================================

BSNT_02265___      1 MRRGIIVEKNKKFVTLLTPDGQFLKAKNDRHSYEIGEEIMLPSETRMGRR     50
                     |||||||||||||||||||||||||.|||..:.||||||....|||||||
RBAM_013230__      1 MRRGIIVEKNKKFVTLLTPDGQFLKTKNDHRTCEIGEEITFEGETRMGRR     50

BSNT_02265___     51 ASFFDFFKLRPFKMGIFTMTAIMLFIFIVLPVFSNNKAYAYMTIDINPSV    100
                     ||||||.||||||:|:||||||:|||.|:|||||:||||||||:|||||:
RBAM_013230__     51 ASFFDFLKLRPFKLGVFTMTAIILFILILLPVFSDNKAYAYMTLDINPSI    100

BSNT_02265___    101 EMALNSDYEVIELTPLNDEGQKVVNDIDDWEKTDFKKVIDDIITDCSEHG    150
                     ||||||.||||||||||.:.::|::||.||:.:|||:||.:||||||:||
RBAM_013230__    101 EMALNSKYEVIELTPLNHDAKQVISDIGDWKSSDFKEVISNIITDCSKHG    150

BSNT_02265___    151 YVKKSKEILISTVYENTEDNTYKKAVKKQLNDVTEKYKTTYRMESLESDM    200
                     |||:|||||||||||||:||||||.|||||.|:|||||.||:::||||||
RBAM_013230__    151 YVKESKEILISTVYENTDDNTYKKGVKKQLADMTEKYKGTYQVQSLESDM    200

BSNT_02265___    201 QTREKAKKEGVSTGSYIKSNEKNDNKDIKDDSSKPSGEE-DQKSDENEDE    249
                     :||||||:||:||||||:.|||...:  |....:..|.| |||..|.:.:
RBAM_013230__    201 ETREKAKQEGMSTGSYIRRNEKKTEE--KQPEKQTDGNETDQKDTETDAD    248

BSNT_02265___    250 NTDQTDTQ----DSKQGDNEQL------NDADSGDQKEEKADDQIDDSDK    289
                     .::|.||:    |.|...:|:.      |:..:...:|.|.|.|..:...
RBAM_013230__    249 QSEQPDTEKPAADEKTAPDEEKAAEKPGNNETTPGTEEAKPDSQDGNQQT    298

BSNT_02265___    290 DKKIKE-SDENTNTEKDGDHEQTPIQDPQDKGNENNGADKGQSQYHRDWN    338
                     :|.... |:|||..|:||:.||.|.|:||:.||:.   :..|..|:..||
RBAM_013230__    299 EKNAASGSEENTQKEQDGETEQPPTQNPQENGNDK---EPKQKYYNHYWN    345

BSNT_02265___    339 NGEQGKNRSSSRRDNASDRRNPNGY-SSDNNSAQNEDSPSAPGE    381
                     :.......|....:::||||||||| ....|:.:.::||.:|||
RBAM_013230__    346 HDRNEHWESYRHHEDSSDRRNPNGYRHGKENADKYQNSPRSPGE    389


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