Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02264 and RBAM_013220

See DNA alignment / Visit BSNT_02264 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:56
# Commandline: needle
#    -asequence pep-align/BSNT_02264___sigI.1.9828.seq
#    -bsequence pep-align/RBAM_013220___sigI.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02264___sigI-RBAM_013220___sigI.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02264___sigI-RBAM_013220___sigI.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02264___sigI
# 2: RBAM_013220___sigI
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 251
# Identity:     227/251 (90.4%)
# Similarity:   241/251 (96.0%)
# Gaps:           3/251 ( 1.2%)
# Score: 1129.0
# 
#
#=======================================

BSNT_02264___      1 MKPVLSLLFKLGKKKQTLEKAVESIQKGNKDLQNELIQQYKPFIAKTVSS     50
                        :|||||||||||||||.:||.||||:|||||:|||||||||||||||
RBAM_013220__      1 ---MLSLLFKLGKKKQTLETSVEKIQKGDKDLQNDLIQQYKPFIAKTVSS     47

BSNT_02264___     51 VCKRYIDEKDDEFSIGLIAFNEAIEKYSPEKGNSLLAFAELIIKRKVIDY    100
                     ||||||||||||||||||||||||||||.|||||||||||||||||||||
RBAM_013220__     48 VCKRYIDEKDDEFSIGLIAFNEAIEKYSAEKGNSLLAFAELIIKRKVIDY     97

BSNT_02264___    101 IRKEARSAQNINIDLQEGDDQESSQSLIEAELSIDEYRRQIEQEQRREEI    150
                     ||||||:||:||:|:|||||||||||||||||||||||:|||||||||||
RBAM_013220__     98 IRKEARTAQHINMDVQEGDDQESSQSLIEAELSIDEYRKQIEQEQRREEI    147

BSNT_02264___    151 LYFQKQLKDYGLSFKELLENSPKHTDARQNAIKVAMTLVEHEELAAILYT    200
                     |:||||||:||||||||||.|||||||||||||||.||||:||||:||:.
RBAM_013220__    148 LFFQKQLKEYGLSFKELLEQSPKHTDARQNAIKVAYTLVENEELASILHQ    197

BSNT_02264___    201 KKQLPVKQLEQLVSVSRKTIERNRKYIIAMCIIITGDYIYLKDYLKGVLH    250
                     ||||||||||||||||||||||||||||||.|||||||||||||||||||
RBAM_013220__    198 KKQLPVKQLEQLVSVSRKTIERNRKYIIAMSIIITGDYIYLKDYLKGVLH    247

BSNT_02264___    251 S    251
                     |
RBAM_013220__    248 S    248


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