Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02264 and RBAM_013220

See Amino acid alignment / Visit BSNT_02264 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:57
# Commandline: needle
#    -asequence dna-align/BSNT_02264___sigI.1.9828.seq
#    -bsequence dna-align/RBAM_013220___sigI.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02264___sigI-RBAM_013220___sigI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02264___sigI-RBAM_013220___sigI.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02264___sigI
# 2: RBAM_013220___sigI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 757
# Identity:     624/757 (82.4%)
# Similarity:   624/757 (82.4%)
# Gaps:          11/757 ( 1.5%)
# Score: 2612.0
# 
#
#=======================================

BSNT_02264___      1 GTGAAACCAGTGCTTAGCCTTTTGTTTAAATTGGGAAAAAAGAAGCAAAC     50
                              |||||||||||||||||||||||||||||||||||||||||
RBAM_013220__      1 ---------GTGCTTAGCCTTTTGTTTAAATTGGGAAAAAAGAAGCAAAC     41

BSNT_02264___     51 ACTTGAAAAAGCTGTTGAGAGTATACAAAAAGGCAATAAAGATCTGCAAA    100
                     .|||||||.|.|||||||.|..||||||||||||.|.|||||||||||.|
RBAM_013220__     42 GCTTGAAACATCTGTTGAAAAAATACAAAAAGGCGACAAAGATCTGCAGA     91

BSNT_02264___    101 ATGAATTAATACAGCAATATAAGCCATTTATCGCAAAGACGGTTTCATCC    150
                     |.||.||||||||||||||||||||.||||||||.|||||||||||||||
RBAM_013220__     92 ACGATTTAATACAGCAATATAAGCCTTTTATCGCGAAGACGGTTTCATCC    141

BSNT_02264___    151 GTTTGTAAACGATATATAGATGAAAAAGACGATGAGTTCAGTATTGGACT    200
                     ||||||||||||||||||||||||||||||||.||.|||||.||.||.||
RBAM_013220__    142 GTTTGTAAACGATATATAGATGAAAAAGACGACGAATTCAGCATCGGGCT    191

BSNT_02264___    201 GATCGCGTTTAATGAAGCTATAGAAAAATATTCACCTGAAAAAGGAAATT    250
                     ||||||||||||.|||||.||.|||||||||||..||||||||||.||||
RBAM_013220__    192 GATCGCGTTTAACGAAGCCATTGAAAAATATTCGGCTGAAAAAGGTAATT    241

BSNT_02264___    251 CTCTGCTCGCATTTGCTGAGCTTATTATAAAAAGAAAAGTCATTGATTAC    300
                     |.|||||.||||||||.|||||.|||||||||||||||||.||.|||||.
RBAM_013220__    242 CGCTGCTTGCATTTGCAGAGCTGATTATAAAAAGAAAAGTGATAGATTAT    291

BSNT_02264___    301 ATTAGAAAAGAAGCCAGAAGCGCACAAAATATAAATATCGATTTACAGGA    350
                     ||.|||||||||||.||||.|||.||..||||.|||||.|||.|.|||||
RBAM_013220__    292 ATCAGAAAAGAAGCAAGAACCGCTCAGCATATCAATATGGATGTGCAGGA    341

BSNT_02264___    351 AGGAGACGATCAGGAGTCATCACAAAGCCTGATTGAAGCCGAGCTTTCCA    400
                     |||.|||||.|||||.||.||.||.|||||.||.|||||.||||||||||
RBAM_013220__    342 AGGCGACGACCAGGAATCTTCGCAGAGCCTTATCGAAGCGGAGCTTTCCA    391

BSNT_02264___    401 TTGATGAATACCGCCGTCAGATTGAACAGGAGCAGAGGCGGGAGGAAATC    450
                     ||||||||||||||...|||||.||||||||.|||.|.|||||.|||||.
RBAM_013220__    392 TTGATGAATACCGCAAACAGATAGAACAGGAACAGCGCCGGGAAGAAATT    441

BSNT_02264___    451 CTCTATTTTCAAAAGCAGCTCAAGGATTATGGTTTATCGTTTAAAGAACT    500
                     ||.|.||||||.||||||||.||.||.||.||..|.||.||||||||.||
RBAM_013220__    442 CTTTTTTTTCAGAAGCAGCTGAAAGAATACGGCCTGTCTTTTAAAGAGCT    491

BSNT_02264___    501 GCTTGAAAATTCTCCAAAGCACACGGATGCAAGGCAAAACGCCATAAAGG    550
                     |||.|||.|.||.||.||.||.||.|||||.|||||.||.||.||.||||
RBAM_013220__    492 GCTGGAACAATCGCCGAAACATACAGATGCGAGGCAGAATGCGATTAAGG    541

BSNT_02264___    551 TGGCAATGACGCTTGTTGAACATGAAGAATTGGCCGCTATCCTGTATACA    600
                     |.||....||||||||||||.|||||||..||||..|.||..||.| .||
RBAM_013220__    542 TAGCCTACACGCTTGTTGAAAATGAAGAGCTGGCGTCCATTTTGCA-CCA    590

BSNT_02264___    601 -AAGAAGCAGCTTCCGGTCAAACAGCTTGAACAGCTTGTCTCTGTAAGCC    649
                      ||.||.||||||||.|||||.|||||.||.|||||.||.||.||.|||.
RBAM_013220__    591 GAAAAAACAGCTTCCTGTCAAGCAGCTGGAGCAGCTCGTGTCGGTCAGCA    640

BSNT_02264___    650 GAAAAACGATTGAGAGAAACAGAAAATATATTATTGCGATGTGTATTATC    699
                     ||||||||||.||..|.|||.||||||||||.||.||.|||.|||||||.
RBAM_013220__    641 GAAAAACGATCGAACGGAACCGAAAATATATCATCGCCATGAGTATTATT    690

BSNT_02264___    700 ATTACGGGTGATTATATTTATTTAAAAGATTATCTTAAAGGGGTGCTGCA    749
                     |||||.|||||||||||||||||||||||||||||||||||||||.||||
RBAM_013220__    691 ATTACCGGTGATTATATTTATTTAAAAGATTATCTTAAAGGGGTGTTGCA    740

BSNT_02264___    750 CTCATGA    756
                     |||||||
RBAM_013220__    741 CTCATGA    747


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_02264 and RBAM_013220

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
