Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02261 and RBAM_013210
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:56
# Commandline: needle
# -asequence pep-align/BSNT_02261___ykoY.1.9828.seq
# -bsequence pep-align/RBAM_013210___ykoY.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02261___ykoY-RBAM_013210___ykoY.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02261___ykoY-RBAM_013210___ykoY.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02261___ykoY
# 2: RBAM_013210___ykoY
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 324
# Identity: 213/324 (65.7%)
# Similarity: 232/324 (71.6%)
# Gaps: 54/324 (16.7%)
# Score: 1072.5
#
#
#=======================================
BSNT_02261___ 1 MYSGNKVVISWIVSIGFVGMPEFMSSKTFALCRQRSFLHGPAGIRSDEEK 50
..||
RBAM_013210__ 1 ----------------------------------------------MIEK 4
BSNT_02261___ 51 ENNFFGRVSFMDAALLLEYGWVLLVLIGLEGILAADNALVMAVMVKHLPE 100
.|...| :|.|||||||||||||||||||||||||||||||||||||
RBAM_013210__ 5 RNGGNG----LDFALLLEYGWVLLVLIGLEGILAADNALVMAVMVKHLPE 50
BSNT_02261___ 101 EKRKKALFYGLAGAFVLRFGSLFAISFLVNVWQVQAIGAIYLLYISASHL 150
::|||||||||||||:||||||||||||||||||||:||:||.||:.|||
RBAM_013210__ 51 KQRKKALFYGLAGAFILRFGSLFAISFLVNVWQVQAVGALYLFYIAVSHL 100
BSNT_02261___ 151 LKRYVFKKEDTHKETKQSGFWPTVLKVELADIAFAVDSILAAVALAVTLP 200
|||||||.....|..|:||||.||||||||||||||||||||||||||||
RBAM_013210__ 101 LKRYVFKDNAGQKTQKESGFWQTVLKVELADIAFAVDSILAAVALAVTLP 150
BSNT_02261___ 201 GTSLPKIGGLDGGQFLVILAGGIIGLVIMRFAASMFVKLLKERPSLETAA 250
||.||.||||||||||||||||:|||:||||||||||.|||.||.|||||
RBAM_013210__ 151 GTQLPAIGGLDGGQFLVILAGGVIGLIIMRFAASMFVSLLKTRPGLETAA 200
BSNT_02261___ 251 FVIVGWVGVKLALYTLAHRDIAVVSEHFIHSGTWKLIFWGVLAAIAVCGW 300
||||||||||||||||||.::.::....|||..||:|||.||||||||||
RBAM_013210__ 201 FVIVGWVGVKLALYTLAHEELGIIPADVIHSAAWKIIFWAVLAAIAVCGW 250
BSNT_02261___ 301 FMSGGKKQPEGAQNEQRNSTRERA 324
||||.|:...||::|:|...
RBAM_013210__ 251 FMSGAKQIESGAESEKREHA---- 270
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