Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02258 and RBAM_013200
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:56
# Commandline: needle
# -asequence pep-align/BSNT_02258___ykoX.1.9828.seq
# -bsequence pep-align/RBAM_013200___ykoX.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02258___ykoX-RBAM_013200___ykoX.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02258___ykoX-RBAM_013200___ykoX.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02258___ykoX
# 2: RBAM_013200___ykoX
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 212
# Identity: 142/212 (67.0%)
# Similarity: 168/212 (79.2%)
# Gaps: 24/212 (11.3%)
# Score: 769.0
#
#
#=======================================
BSNT_02258___ 1 MAIEELVMSWIEAFKSLSYFGIFLALSIEFIPAEVVLPLAGYWVSKGDMT 50
:||||||||||:|||||||||||||||
RBAM_013200__ 1 -----------------------MALSIEFIPAEIVLPLAGYWVSKGDMT 27
BSNT_02258___ 51 LAGVVLAGSLGGVAGPLTLYWIGRYGGRPFLERFGKYLFIKPEALDKSDK 100
|||.|.|||||||:|||.||.|||.||||||.::|||::||||:|.|||.
RBAM_013200__ 28 LAGTVFAGSLGGVSGPLVLYGIGRLGGRPFLLKYGKYIWIKPESLQKSDD 77
BSNT_02258___ 101 FFKKHGGFVAFSGRFLPGIRTLISIPCGIAKMNVWVFSLYTFIAMLPITF 150
||:||||.|||||||:||:|||||:||||||||||||||||:.|||||||
RBAM_013200__ 78 FFQKHGGLVAFSGRFIPGVRTLISLPCGIAKMNVWVFSLYTYAAMLPITF 127
BSNT_02258___ 151 VYVYLGVKLGENWKEVGSILDQYMLPIGIAILALFLLYLLMKKRKKRTHS 200
.|||||:|||||||.|||||||||||:||.|:.|.:|::.:|:||:|..:
RBAM_013200__ 128 AYVYLGMKLGENWKSVGSILDQYMLPLGIFIVLLLILWMFLKRRKQRAKT 177
BSNT_02258___ 201 EQLSVFLKN-KR 211
|::|.|:|. ||
RBAM_013200__ 178 EKISQFVKKVKR 189
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