Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02245 and RBAM_013170
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:56
# Commandline: needle
# -asequence pep-align/BSNT_02245.1.9828.seq
# -bsequence pep-align/RBAM_013170___ykoP.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02245-RBAM_013170___ykoP.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02245-RBAM_013170___ykoP.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02245
# 2: RBAM_013170___ykoP
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 215
# Identity: 121/215 (56.3%)
# Similarity: 152/215 (70.7%)
# Gaps: 32/215 (14.9%)
# Score: 661.0
#
#
#=======================================
BSNT_02245 1 MTVLLKKYGNYILRRTFTKYKGVFDHKEGEKMKTCFLSIWRVVDPIYFFF 50
|::|.||||.::||:||||
RBAM_013170__ 1 -------------------------------MRSCLLSIWYLLDPLYFFF 19
BSNT_02245 51 SRLTLVDKDRKSVFRVRLTKYKGHHVVLSDGTHIRKNDVLVKIHLHNIKL 100
:||||:||.:.:|||||||:|||..|:|||||.|:||||||||||||:||
RBAM_013170__ 20 TRLTLIDKRQSNVFRVRLTRYKGKEVILSDGTRIKKNDVLVKIHLHNVKL 69
BSNT_02245 101 IRELQSIESAVRKGIIIYQKVYQSMPLLLDYINNHKKSEKIKGIVGITML 150
::|||.||||||:||::|||||||||.|.||||.||:.::|||:||||||
RBAM_013170__ 70 LKELQPIESAVRRGIMLYQKVYQSMPHLADYINQHKRKDEIKGVVGITML 119
BSNT_02245 151 DKGVERLGFDVVTPVNPFYRCFKKITHIPIFYLTSKQVSLRRLPNTSYLF 200
.||..||||||:.|.:..||.|||..||||.|.|:||::|:.:|.:.|||
RBAM_013170__ 120 HKGAARLGFDVIKPSSGCYRLFKKAAHIPILYFTAKQLTLKNIPYSCYLF 169
BSNT_02245 201 ISKEKLQKTYQKKD- 214
||||||..|||.:.
RBAM_013170__ 170 ISKEKLMCTYQTEKS 184
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