Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02242 and RBAM_013160

See DNA alignment / Visit BSNT_02242 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:56
# Commandline: needle
#    -asequence pep-align/BSNT_02242___ykoM.1.9828.seq
#    -bsequence pep-align/RBAM_013160___ykoM.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02242___ykoM-RBAM_013160___ykoM.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02242___ykoM-RBAM_013160___ykoM.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02242___ykoM
# 2: RBAM_013160___ykoM
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 154
# Identity:     146/154 (94.8%)
# Similarity:   151/154 (98.1%)
# Gaps:           0/154 ( 0.0%)
# Score: 749.0
# 
#
#=======================================

BSNT_02242___      1 MMRLSFNEEEVERAMNLYRVFARAFKSVSEHSIRDSKEHGFNPTEFAVLE     50
                     |||||||||||.|:||||:|||||||||||||||||||||||||||||||
RBAM_013160__      1 MMRLSFNEEEVMRSMNLYKVFARAFKSVSEHSIRDSKEHGFNPTEFAVLE     50

BSNT_02242___     51 LLYTRGPQKLQQIGSRLLLVSGNVTYVIDKLERNGFLVREQDPKDKRSVY    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_013160__     51 LLYTRGPQKLQQIGSRLLLVSGNVTYVIDKLERNGFLVREQDPKDKRSVY    100

BSNT_02242___    101 AHLTDKGNEYLDKIYPIHALRIARAFSGLSPDEQDQLIVLLKKAGIHSQH    150
                     ||||||||||||||||||:||||||||||.|:||:|||.|||||||||||
RBAM_013160__    101 AHLTDKGNEYLDKIYPIHSLRIARAFSGLMPEEQEQLIALLKKAGIHSQH    150

BSNT_02242___    151 LLFR    154
                     ||||
RBAM_013160__    151 LLFR    154


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