Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02242 and RBAM_013160
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:56
# Commandline: needle
# -asequence dna-align/BSNT_02242___ykoM.1.9828.seq
# -bsequence dna-align/RBAM_013160___ykoM.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02242___ykoM-RBAM_013160___ykoM.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02242___ykoM-RBAM_013160___ykoM.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02242___ykoM
# 2: RBAM_013160___ykoM
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 466
# Identity: 397/466 (85.2%)
# Similarity: 397/466 (85.2%)
# Gaps: 2/466 ( 0.4%)
# Score: 1697.0
#
#
#=======================================
BSNT_02242___ 1 ATGATGAGATTATCGTTTAACGAAGAAGAAGTTGA-GCGTGCGATGAATT 49
||||||||||||||.|||||||||||||||| ||| ||||.|||||||||
RBAM_013160__ 1 ATGATGAGATTATCATTTAACGAAGAAGAAG-TGATGCGTTCGATGAATT 49
BSNT_02242___ 50 TGTACAGAGTTTTTGCAAGGGCTTTCAAAAGTGTGTCCGAACATAGTATC 99
||||||.|||||||||||||||||||||.||||||||.|||||.||.|||
RBAM_013160__ 50 TGTACAAAGTTTTTGCAAGGGCTTTCAAGAGTGTGTCTGAACACAGCATC 99
BSNT_02242___ 100 CGTGATAGCAAAGAGCACGGTTTTAATCCCACTGAATTTGCTGTACTGGA 149
||.||.||.|||||.||||||||||||||.|||||||||||.||..||||
RBAM_013160__ 100 CGCGACAGTAAAGAACACGGTTTTAATCCGACTGAATTTGCCGTTTTGGA 149
BSNT_02242___ 150 GCTCCTGTACACAAGAGGCCCGCAAAAATTACAGCAAATTGGGTCGAGAC 199
|||.||.||.||.|||||.||||||||..|.||||||||.||||||.|.|
RBAM_013160__ 150 GCTGCTTTATACGAGAGGACCGCAAAAGCTTCAGCAAATCGGGTCGCGTC 199
BSNT_02242___ 200 TTCTGCTTGTAAGCGGAAACGTCACATATGTTATTGACAAACTAGAAAGA 249
||.|||||||.|||||.||.|||||.|||||.||.|||||.||.||||||
RBAM_013160__ 200 TTTTGCTTGTCAGCGGGAATGTCACCTATGTCATCGACAAGCTTGAAAGA 249
BSNT_02242___ 250 AACGGGTTTTTAGTAAGGGAGCAGGACCCGAAAGATAAACGCTCTGTTTA 299
|||||||||||.||.||.||.||.||.|||||.||.|||||.||||||||
RBAM_013160__ 250 AACGGGTTTTTGGTCAGAGAACAAGATCCGAAGGACAAACGGTCTGTTTA 299
BSNT_02242___ 300 CGCACATTTAACTGACAAGGGAAATGAGTATTTGGATAAAATTTATCCGA 349
|||.|||||||||||.||.|||||.|||||||||||||||||||||||||
RBAM_013160__ 300 CGCCCATTTAACTGATAAAGGAAACGAGTATTTGGATAAAATTTATCCGA 349
BSNT_02242___ 350 TTCATGCACTGCGTATTGCGAGAGCGTTTTCAGGTCTTTCGCCTGATGAA 399
|||||.||.||.|.||||||||||||||||||||.|||..||||||.|||
RBAM_013160__ 350 TTCATTCATTGAGAATTGCGAGAGCGTTTTCAGGGCTTATGCCTGAGGAA 399
BSNT_02242___ 400 CAGGACCAGCTGATCGTCCTGCTCAAGAAAGCAGGCATACACAGCCAGCA 449
|||||.||||||||.|.||||||.||.|||||.||.||.||||||||.||
RBAM_013160__ 400 CAGGAACAGCTGATAGCCCTGCTGAAAAAAGCGGGAATTCACAGCCAACA 449
BSNT_02242___ 450 TTTGCTGTTTCGTTAA 465
||||||.||.||||||
RBAM_013160__ 450 TTTGCTTTTCCGTTAA 465
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