Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_02241 and RBAM_013150

See DNA alignment / Visit BSNT_02241 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:56
# Commandline: needle
#    -asequence pep-align/BSNT_02241___ykoL.1.9828.seq
#    -bsequence pep-align/RBAM_013150___ykoL.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02241___ykoL-RBAM_013150___ykoL.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02241___ykoL-RBAM_013150___ykoL.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02241___ykoL
# 2: RBAM_013150___ykoL
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 60
# Identity:      40/60 (66.7%)
# Similarity:    49/60 (81.7%)
# Gaps:           0/60 ( 0.0%)
# Score: 212.0
# 
#
#=======================================

BSNT_02241___      1 MSNLLKSALEKERRHYSEKLYQIGVYNKEVMNKMTISELRKEYAYFFRSI     50
                     ||.||::||:|||.|||:||.|||||.||::|.|||:|||||||||||:|
RBAM_013150__      1 MSRLLQNALDKERNHYSKKLLQIGVYTKEILNSMTITELRKEYAYFFRNI     50

BSNT_02241___     51 TNHKNYPYTR     60
                     ...:..|||.
RBAM_013150__     51 PYKERNPYTN     60


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.