Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02241 and RBAM_013150
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:56
# Commandline: needle
# -asequence dna-align/BSNT_02241___ykoL.1.9828.seq
# -bsequence dna-align/RBAM_013150___ykoL.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02241___ykoL-RBAM_013150___ykoL.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02241___ykoL-RBAM_013150___ykoL.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02241___ykoL
# 2: RBAM_013150___ykoL
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 197
# Identity: 129/197 (65.5%)
# Similarity: 129/197 (65.5%)
# Gaps: 28/197 (14.2%)
# Score: 376.0
#
#
#=======================================
BSNT_02241___ 1 ATGAGTAATTT--ATTGAAATCCGCTTTAGAAAAAGAACGACGCCATTAT 48
||||||..||| .|..|||| ||.||.||.|||||..||..|||||||
RBAM_013150__ 1 ATGAGTCGTTTGCTTCAAAAT--GCATTGGACAAAGAGAGAAACCATTAT 48
BSNT_02241___ 49 TCTGAAAAAC-TCTATCAGATTGGGGTTTATAATAAAGAGGTCATGAA-- 95
||..||||.| ||| .|||||.||.||.||||..||||| ||
RBAM_013150__ 49 TCCAAAAAGCTTCT-GCAGATCGGAGTCTATACGAAAGA-------AATA 90
BSNT_02241___ 96 --CAA---AATGACGATTTCTGAGCTTCGGAAAGAATACGCTTATTTCTT 140
||| .|||||.|||.|.|||||..|.||.||||||||.|||||.||
RBAM_013150__ 91 CTCAATTCCATGACAATTACGGAGCTGAGAAAGGAATACGCGTATTTTTT 140
BSNT_02241___ 141 TCGAAGCATTACAAATC-ATAAAAA---TTATCCTTATACAAGATAA 183
|||.|.||||.| | |||||.| ..|.||||||||||..|||
RBAM_013150__ 141 TCGGAACATTCC----CTATAAAGAACGGAACCCTTATACAAATTAA 183
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