Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02237 and RBAM_013120

See DNA alignment / Visit BSNT_02237 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:55
# Commandline: needle
#    -asequence pep-align/BSNT_02237___ykoK.1.9828.seq
#    -bsequence pep-align/RBAM_013120___ykoK.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02237___ykoK-RBAM_013120___ykoK.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02237___ykoK-RBAM_013120___ykoK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02237___ykoK
# 2: RBAM_013120___ykoK
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 451
# Identity:     394/451 (87.4%)
# Similarity:   428/451 (94.9%)
# Gaps:           0/451 ( 0.0%)
# Score: 2007.0
# 
#
#=======================================

BSNT_02237___      1 MVQNMTYDELILRIIILLRDGKIRDFRSVIDELQPYDMAFIFKEMPEKHR     50
                     |||||||||||||||||||||||::||::|||||||||||:|||||||||
RBAM_013120__      1 MVQNMTYDELILRIIILLRDGKIKEFRNMIDELQPYDMAFLFKEMPEKHR     50

BSNT_02237___     51 ARYLSYLTVDDITDMIGELEREFQLVVLNKVGKTKATLAMNKMDNDDLAQ    100
                     ||||||:||||||||||||||||||.||:||||||||||||||||||||.
RBAM_013120__     51 ARYLSYMTVDDITDMIGELEREFQLAVLHKVGKTKATLAMNKMDNDDLAA    100

BSNT_02237___    101 LLEEMDEELKEQLLSSMEASESKAVQLLMNYPADSAGRMMTNRYVWIPQH    150
                     |||||||||||||||||||.||||||||||||.:|||||||||:||||||
RBAM_013120__    101 LLEEMDEELKEQLLSSMEAEESKAVQLLMNYPQESAGRMMTNRFVWIPQH    150

BSNT_02237___    151 YTVKDAVVKLKSFAEIAESINYLYVINESKQLVGVLSYRDLILGEPEEKV    200
                     |||||||||||||||||||||||||||:|||||||||||||||||||:||
RBAM_013120__    151 YTVKDAVVKLKSFAEIAESINYLYVINDSKQLVGVLSYRDLILGEPEDKV    200

BSNT_02237___    201 QDLMFTRVISADALQDQEEVARLIERYDFLAIPVVEENNVLVGIVTVDDI    250
                     |||||||||||..|||||||||||:||||||||:||||:|||||||||||
RBAM_013120__    201 QDLMFTRVISAGVLQDQEEVARLIQRYDFLAIPIVEENHVLVGIVTVDDI    250

BSNT_02237___    251 IDVVIREADEDYEKFAASGKDITFDTKAYVAAYRRLPWLILLLFIGLISG    300
                     |||||:||||||||||||||.|||||||||||||||||||||||||||||
RBAM_013120__    251 IDVVIKEADEDYEKFAASGKAITFDTKAYVAAYRRLPWLILLLFIGLISG    300

BSNT_02237___    301 SIISYFEDALKQVVALAFFMPMVSGMTGNTGTQSLAVVIRGLSKEEMNKK    350
                     ||::||||.|::||||||||||::|.||||||||||||||||:|||||||
RBAM_013120__    301 SILNYFEDTLQKVVALAFFMPMIAGTTGNTGTQSLAVVIRGLAKEEMNKK    350

BSNT_02237___    351 TIVRLIFREFRTSIFIGAVCSVLIAIVSIIWQGNALLGFVVASSLFLTLI    400
                     ||.:|||||.||.|:||.||::.|.||:.:||.:..|||||.|||..|||
RBAM_013120__    351 TIFKLIFRELRTGIYIGIVCAIAITIVATVWQKDLTLGFVVGSSLLATLI    400

BSNT_02237___    401 IGTMSGTIIPIILHKLKVDPAIASGPLITTLNDILSLLIYFGIATAFIHS    450
                     ||||:|||:|||||||.:|||||||||||||||||||||||||||||:|:
RBAM_013120__    401 IGTMAGTIVPIILHKLNIDPAIASGPLITTLNDILSLLIYFGIATAFLHA    450

BSNT_02237___    451 L    451
                     |
RBAM_013120__    451 L    451


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