Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02236 and RBAM_013110

See DNA alignment / Visit BSNT_02236 in genome browser / Return to Orthologue table

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# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:55
# Commandline: needle
#    -asequence pep-align/BSNT_02236___ykzD.1.9828.seq
#    -bsequence pep-align/RBAM_013110___ykzD.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02236___ykzD-RBAM_013110___ykzD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02236___ykzD-RBAM_013110___ykzD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02236___ykzD
# 2: RBAM_013110___ykzD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 45
# Identity:      34/45 (75.6%)
# Similarity:    40/45 (88.9%)
# Gaps:           0/45 ( 0.0%)
# Score: 193.0
# 
#
#=======================================

BSNT_02236___      1 MEKKEEQYINQAEYVPHPTKEGEYALFLHETYHLLSEDDETQTTE     45
                     |:|:||||||:|||||||||||||||.|||:||.|||:||:...|
RBAM_013110__      1 MKKREEQYINEAEYVPHPTKEGEYALMLHESYHFLSEEDESDLPE     45


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