Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02223 and RBAM_013070

See DNA alignment / Visit BSNT_02223 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:55
# Commandline: needle
#    -asequence pep-align/BSNT_02223___ykoC.1.9828.seq
#    -bsequence pep-align/RBAM_013070___ykoC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02223___ykoC-RBAM_013070___ykoC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02223___ykoC-RBAM_013070___ykoC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02223___ykoC
# 2: RBAM_013070___ykoC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 254
# Identity:     181/254 (71.3%)
# Similarity:   214/254 (84.3%)
# Gaps:           1/254 ( 0.4%)
# Score: 968.0
# 
#
#=======================================

BSNT_02223___      1 MKQPLHLINATVKAAAVFCCVVMLSFIYNPYTPACFYIIIIAGVLLAAGI     50
                     |...|..:|.::|||||..||:||||||||||||.|||||..|||.|..:
RBAM_013070__      1 MNLRLEAVNPSIKAAAVLLCVIMLSFIYNPYTPALFYIIIAGGVLSAGRV     50

BSNT_02223___     51 PLKKWLLFTIPFLILAFGCVWTAAVFGKVPTTPDNFLFQAGPISINSDNV    100
                     ||||||||||||:|||||.:|||||||.:|||..|.||:.|||::||||.
RBAM_013070__     51 PLKKWLLFTIPFVILAFGSLWTAAVFGNIPTTGSNLLFKLGPIAVNSDNA    100

BSNT_02223___    101 SVGISLGFRILCFSALSMMFVFTTDPILFMLSLVQQCRLSPKLAYGVIAG    150
                     ::|||:.|||||||||||||:||||||||||||:|||:|.||||||||||
RBAM_013070__    101 ALGISIAFRILCFSALSMMFLFTTDPILFMLSLIQQCKLPPKLAYGVIAG    150

BSNT_02223___    151 FRFLPLLKDEVQLIQQAHKIRGGAAESGIINKIGALKRYTIPLLVSAIRK    200
                     ||||||||||:.:|:|||:|||.|::||:..|:.|.:|:|||||..||||
RBAM_013070__    151 FRFLPLLKDEILIIRQAHRIRGAASDSGLKGKLSAFRRFTIPLLAGAIRK    200

BSNT_02223___    201 AERTALAMESKGFTGSRNRTYYRTLSVNRRDWVFFCLVLLLFAGSFLVSL    250
                     |||||:||||||||||||||:|||::|.|.||.||.||||||..|:|:||
RBAM_013070__    201 AERTAIAMESKGFTGSRNRTFYRTVTVRRADWCFFLLVLLLFGASWLISL    250

BSNT_02223___    251 CFAS    254
                     .|. 
RBAM_013070__    251 LFV-    253


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