Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02220 and RBAM_013050

See DNA alignment / Visit BSNT_02220 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:55
# Commandline: needle
#    -asequence pep-align/BSNT_02220___ispA.1.9828.seq
#    -bsequence pep-align/RBAM_013050___ispA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02220___ispA-RBAM_013050___ispA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02220___ispA-RBAM_013050___ispA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02220___ispA
# 2: RBAM_013050___ispA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 319
# Identity:     278/319 (87.1%)
# Similarity:   305/319 (95.6%)
# Gaps:           0/319 ( 0.0%)
# Score: 1455.0
# 
#
#=======================================

BSNT_02220___      1 MNGEIRLIPYVTNEQIMDVNELPEGIKVIKAPEMWAKGVKGKNIKVAVLD     50
                     ||||:.||||||:||||||||||||||||||||:||||.|||:||:||||
RBAM_013050__      1 MNGEMHLIPYVTDEQIMDVNELPEGIKVIKAPELWAKGFKGKDIKIAVLD     50

BSNT_02220___     51 TGCDTSHPDLKNQIIGGKNFTDDDGGKEDAISDYNGHGTHVAGTIAANDS    100
                     ||||.:|||||::|:||||||||||||||||||||||||||:||||||||
RBAM_013050__     51 TGCDINHPDLKDRIVGGKNFTDDDGGKEDAISDYNGHGTHVSGTIAANDS    100

BSNT_02220___    101 NGGIAGVAPEASLLIVKVLGGENGSGQYEWIINGINYAVEQKVDIISMSL    150
                     ||||:||||||||||||||||:||||:|||||||||||||||.|||||||
RBAM_013050__    101 NGGISGVAPEASLLIVKVLGGQNGSGKYEWIINGINYAVEQKADIISMSL    150

BSNT_02220___    151 GGPSDVPELEEAVKNAVKNGVLVVCAAGNEGDGDERTEELSYPAAYNEVI    200
                     |||||||||:|||.||||:|||||||||||||||||||||||||||||||
RBAM_013050__    151 GGPSDVPELKEAVTNAVKSGVLVVCAAGNEGDGDERTEELSYPAAYNEVI    200

BSNT_02220___    201 AVGSVSVARELSEFSNANKEIDLVAPGENILSTLPNKKYGKLTGTSMAAP    250
                     ||||||:||:.|||||||||||||||||||||||||.|||||||||||||
RBAM_013050__    201 AVGSVSIARKSSEFSNANKEIDLVAPGENILSTLPNHKYGKLTGTSMAAP    250

BSNT_02220___    251 HVSGALALIKSYEEESFQRKLSESEVFAQLIRRTLPLDIAKTLAGNGFLY    300
                     ||||||||||..|:::|||.|||:||:|||:|||||||||||||||||||
RBAM_013050__    251 HVSGALALIKGLEQDAFQRTLSEAEVYAQLVRRTLPLDIAKTLAGNGFLY    300

BSNT_02220___    301 LTAPDELAEKAEQSHLLTL    319
                     |.||:||.|:|||:.||:.
RBAM_013050__    301 LDAPEELMERAEQAQLLSF    319


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