Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02212 and RBAM_012970

See DNA alignment / Visit BSNT_02212 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:54
# Commandline: needle
#    -asequence pep-align/BSNT_02212___ykzA.1.9828.seq
#    -bsequence pep-align/RBAM_012970___ohrB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02212___ykzA-RBAM_012970___ohrB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02212___ykzA-RBAM_012970___ohrB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02212___ykzA
# 2: RBAM_012970___ohrB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 136
# Identity:     111/136 (81.6%)
# Similarity:   127/136 (93.4%)
# Gaps:           0/136 ( 0.0%)
# Score: 587.0
# 
#
#=======================================

BSNT_02212___      1 MALFTAKVTARGGRAGHITSDDGVLDFDIVMPNAKKEGQTGTNPEQLFAA     50
                     |||||:|.||.|||||||.|:||||||||:||||||:|:|||||||||||
RBAM_012970__      1 MALFTSKATAVGGRAGHIKSEDGVLDFDIIMPNAKKDGETGTNPEQLFAA     50

BSNT_02212___     51 GYAACFGGALEHVAKEQNIEIDSEIEGQVSLMKDESDGGFKIGVTLVVNT    100
                     |||||||||||..|::|.|::.|||||||||:|||||||:|||||||::|
RBAM_012970__     51 GYAACFGGALELAAQKQKIDMTSEIEGQVSLLKDESDGGYKIGVTLVIDT    100

BSNT_02212___    101 KDLDREKAHELVNAAHEFCPYSKATRGNVDVKLELK    136
                     ||||:|.|.:||:|||||||||||||||||||||||
RBAM_012970__    101 KDLDKETAEKLVHAAHEFCPYSKATRGNVDVKLELK    136


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