Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02212 and RBAM_012970
See
Amino acid alignment /
Visit
BSNT_02212 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:54
# Commandline: needle
# -asequence dna-align/BSNT_02212___ykzA.1.9828.seq
# -bsequence dna-align/RBAM_012970___ohrB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02212___ykzA-RBAM_012970___ohrB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02212___ykzA-RBAM_012970___ohrB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02212___ykzA
# 2: RBAM_012970___ohrB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 412
# Identity: 322/412 (78.2%)
# Similarity: 322/412 (78.2%)
# Gaps: 2/412 ( 0.5%)
# Score: 1238.0
#
#
#=======================================
BSNT_02212___ 1 ATGGCACTATTTACAGCAAAAGTAACCGCGCGAGGCGGACGGGCAGGACA 50
||||||.|||||||..||||||..|||||....||||||||.||||||||
RBAM_012970__ 1 ATGGCATTATTTACTTCAAAAGCGACCGCAGTCGGCGGACGAGCAGGACA 50
BSNT_02212___ 51 TATTACATCAGATGACGGTGTTCTTGATTTTGATATTGTCATGCCAAATG 100
|||||.|||.||.|||||.||.||.||||||||.||..|||||||.||||
RBAM_012970__ 51 TATTAAATCCGAAGACGGGGTGCTGGATTTTGACATCATCATGCCGAATG 100
BSNT_02212___ 101 CCAAAAAAGAAGGACAAACCGGCACAAATCCGGAACAGCTCTTTGCGGCA 150
|.||||||||.|||.|||||||||||||.||.||||||||||||||||||
RBAM_012970__ 101 CAAAAAAAGACGGAGAAACCGGCACAAACCCTGAACAGCTCTTTGCGGCA 150
BSNT_02212___ 151 GGGTATGCTGCATGCTTCGGCGGCGCGCTCGAACACGTAGCCAAAGAGCA 200
||.||||||||.||||||||.||.|||||.||.|.||..|||.||.|.||
RBAM_012970__ 151 GGATATGCTGCCTGCTTCGGGGGAGCGCTTGAGCTCGCCGCCCAAAAACA 200
BSNT_02212___ 201 GAATATCGAAATTGA-TTCGGAGATTGAAGGGCAGGTCAGCCTCATGAAG 249
.||.|||||.| ||| .||.||.||||||||.|||||||||||..|.||.
RBAM_012970__ 201 AAAAATCGACA-TGACCTCTGAAATTGAAGGACAGGTCAGCCTTTTAAAA 249
BSNT_02212___ 250 GATGAGAGCGACGGCGGGTTTAAAATCGGTGTCACACTAGTTGTGAACAC 299
||||||||.|||||.||.|..||||||||.||.||.||.||..|..|.||
RBAM_012970__ 250 GATGAGAGTGACGGAGGTTACAAAATCGGCGTAACGCTCGTCATTGATAC 299
BSNT_02212___ 300 GAAAGATTTAGATCGGGAAAAAGCACATGAGCTTGTCAACGCCGCTCATG 349
.||||||.|.||....||||..||..|..|||||||..|.||||||||.|
RBAM_012970__ 300 AAAAGATCTTGACAAAGAAACGGCGGAGAAGCTTGTGCATGCCGCTCACG 349
BSNT_02212___ 350 AATTCTGTCCTTACTCAAAGGCAACCAGAGGAAATGTTGATGTAAAACTA 399
|.||||||||.||.|||||.|||||.|||||||||||.||.||.|||||.
RBAM_012970__ 350 AGTTCTGTCCGTATTCAAAAGCAACAAGAGGAAATGTAGACGTCAAACTT 399
BSNT_02212___ 400 GAATTAAAATAA 411
||||||||||||
RBAM_012970__ 400 GAATTAAAATAA 411
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.