Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02210 and RBAM_012960
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:54
# Commandline: needle
# -asequence pep-align/BSNT_02210___ykmA.1.9828.seq
# -bsequence pep-align/RBAM_012960___ohrR.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02210___ykmA-RBAM_012960___ohrR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02210___ykmA-RBAM_012960___ohrR.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02210___ykmA
# 2: RBAM_012960___ohrR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 169
# Identity: 105/169 (62.1%)
# Similarity: 119/169 (70.4%)
# Gaps: 22/169 (13.0%)
# Score: 531.0
#
#
#=======================================
BSNT_02210___ 1 ----------------------MENKFDHMKLENQLCFLLYASSREMIKQ 28
.|..|:|||||||||||||||||||.|:
RBAM_012960__ 1 MDCFSATIGVTLTNKELVKEVMAEKDFEHMKLENQLCFLLYASSREMTKR 50
BSNT_02210___ 29 YKPLLDKLNITYPQYLALLLLWEHETLTVKKMGEQLYLDSGTLTPMLKRM 78
|||||||||:|||||||||||||||.|.||:|||.|||||||||||||||
RBAM_012960__ 51 YKPLLDKLNVTYPQYLALLLLWEHEELNVKRMGELLYLDSGTLTPMLKRM 100
BSNT_02210___ 79 EQQGLITRKRSEEDERSVLISLTEDGALLKDKAVDIPETILGLSKQSGED 128
||.|:|.||||.||||||.|.||::|..|:..|.|||..:|..:.:|.|:
RBAM_012960__ 101 EQHGIIMRKRSAEDERSVTIRLTDEGRALQKTAADIPIAMLEQTGRSKEE 150
BSNT_02210___ 129 LKQLKSALYTLLETLHQKN 147
|||||.:||.:|.|||.|.
RBAM_012960__ 151 LKQLKQSLYEVLNTLHGKK 169
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