Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02207 and RBAM_012950

See DNA alignment / Visit BSNT_02207 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:54
# Commandline: needle
#    -asequence pep-align/BSNT_02207___yklA.1.9828.seq
#    -bsequence pep-align/RBAM_012950___ohrA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02207___yklA-RBAM_012950___ohrA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02207___yklA-RBAM_012950___ohrA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02207___yklA
# 2: RBAM_012950___ohrA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 141
# Identity:     112/141 (79.4%)
# Similarity:   125/141 (88.7%)
# Gaps:           0/141 ( 0.0%)
# Score: 571.0
# 
#
#=======================================

BSNT_02207___      1 MSQPLFTATVSAVGGREGKVISSDRVLELDVAMPGTPRAKKLEKATNPEQ     50
                     |::|||||||||.|||||||.|||.||.||||||||||||:||.||||||
RBAM_012950__      1 MTKPLFTATVSAAGGREGKVTSSDGVLNLDVAMPGTPRAKRLEHATNPEQ     50

BSNT_02207___     51 LFAAGYAACFDSALQLVARTERVKVETEVTANVSLLKDEADQGYKLGVTL    100
                     ||||||:||||||||||||.||:.:||||||:|||||||.||||||||||
RBAM_012950__     51 LFAAGYSACFDSALQLVARKERLSIETEVTAHVSLLKDEEDQGYKLGVTL    100

BSNT_02207___    101 QVKGEGVSASELEALVKKAHGVCPYSKATSGNIDVTLEVAE    141
                     :||..|:...|||||::||||||||||||:|||:|.|..||
RBAM_012950__    101 EVKASGIDKQELEALIQKAHGVCPYSKATAGNIEVKLLAAE    141


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