Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02207 and RBAM_012950

See Amino acid alignment / Visit BSNT_02207 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:54
# Commandline: needle
#    -asequence dna-align/BSNT_02207___yklA.1.9828.seq
#    -bsequence dna-align/RBAM_012950___ohrA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02207___yklA-RBAM_012950___ohrA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02207___yklA-RBAM_012950___ohrA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02207___yklA
# 2: RBAM_012950___ohrA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 437
# Identity:     316/437 (72.3%)
# Similarity:   316/437 (72.3%)
# Gaps:          22/437 ( 5.0%)
# Score: 1106.5
# 
#
#=======================================

BSNT_02207___      1 ATGAGTCAGCCATTATTTACAGCAACTGTTTCAGCGGTAGGAGGAAGAGA     50
                     ||||...|.|||||||||||.|||||.||.|||||.|..||.|||.|.||
RBAM_012950__      1 ATGACAAAACCATTATTTACTGCAACCGTATCAGCCGCCGGCGGACGTGA     50

BSNT_02207___     51 AGGAAAGGTCATTTCATCAGACCGCGTTCTTGAGCTTGATGTCGCAATGC    100
                     |||.||.||||..||.||.|||.|.||.||..|.||||||||.||.||||
RBAM_012950__     51 AGGGAAAGTCACGTCTTCTGACGGAGTGCTGAATCTTGATGTTGCTATGC    100

BSNT_02207___    101 CGGGGACACCAAGAGCAAAGAAATTAGAAAAAGCGACAAATCCAGAGCAG    150
                     ||||.||.|||||||||||.....|.|||.|.||.|||||.||.||.|||
RBAM_012950__    101 CGGGAACGCCAAGAGCAAAACGGCTCGAACATGCCACAAACCCTGAACAG    150

BSNT_02207___    151 CTGTTTGCAGCAGGTTATGCAGCTTGCTTTGACAGCGCCCTGCAGCTTGT    200
                     ||||||||.|||||.|||.||||.||||||||||||||.||.|||||.||
RBAM_012950__    151 CTGTTTGCCGCAGGATATTCAGCCTGCTTTGACAGCGCTCTTCAGCTCGT    200

BSNT_02207___    201 CGCAAGAACAGAACGGGTAAAAGTA--GAGACAGAGGTTACAGCGAATGT    248
                     .||.||||.|||  |.||...||||  ||.||||||||.||.|||.||||
RBAM_012950__    201 AGCGAGAAAAGA--GCGTCTGAGTATTGAAACAGAGGTCACTGCGCATGT    248

BSNT_02207___    249 AAGTCTGTTAAAGGATGAAGCGGACCAGGGCTACAAGCTTGGTGTGACGC    298
                     .||||||.|.||.|||||||..|||||.||.||.||.||.||.||.||||
RBAM_012950__    249 CAGTCTGCTGAAAGATGAAGAAGACCAAGGATATAAACTAGGCGTTACGC    298

BSNT_02207___    299 TGCAAGTAAAAGGAGAAGGAGTCAGTGCAT-------CAGAA--TTGGAG    339
                     |..|.||.||||.|       ||.| ||||       |||.|  || ||.
RBAM_012950__    299 TTGAGGTCAAAGCA-------TCCG-GCATTGATAAACAGGAGCTT-GAA    339

BSNT_02207___    340 GCGCTTGTGAAAAAAGCGCACGGCGTCTGCCCGTATTCAAAAGCAACCTC    389
                     ||.|||.|..|||||||||||||.||||||||.|||||||||||.||..|
RBAM_012950__    340 GCCCTTATCCAAAAAGCGCACGGTGTCTGCCCTTATTCAAAAGCGACAGC    389

BSNT_02207___    390 CGGAAATATTGATGTGACACTTGAAGTTGCTGAATAA    426
                     .|||||||||||.||||..|||...|..||.||||||
RBAM_012950__    390 GGGAAATATTGAAGTGAAGCTTCTGGCAGCAGAATAA    426


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