Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02204 and RBAM_012920

See DNA alignment / Visit BSNT_02204 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:54
# Commandline: needle
#    -asequence pep-align/BSNT_02204___purU.1.9828.seq
#    -bsequence pep-align/RBAM_012920___purU.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02204___purU-RBAM_012920___purU.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02204___purU-RBAM_012920___purU.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02204___purU
# 2: RBAM_012920___purU
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 300
# Identity:     271/300 (90.3%)
# Similarity:   285/300 (95.0%)
# Gaps:           0/300 ( 0.0%)
# Score: 1413.0
# 
#
#=======================================

BSNT_02204___      1 MKSYMTQRLDEYRDGNEDKGRLLVSCPDQPGIVSAVSAFLFEHDANIIES     50
                     |.|||||||.|||.|||:|||||||||||||||||||||||||.||||||
RBAM_012920__      1 MNSYMTQRLKEYRRGNEEKGRLLVSCPDQPGIVSAVSAFLFEHGANIIES     50

BSNT_02204___     51 NQYTTDPEGGRFFLRIEFDCAGIREKKASLQAAFASVAEKFDMTWSLTLA    100
                     ||||||||||||||||||||.||||||..||.||||:|:.|.|||||:||
RBAM_012920__     51 NQYTTDPEGGRFFLRIEFDCKGIREKKEDLQQAFASIAQTFGMTWSLSLA    100

BSNT_02204___    101 SELKRVAIFVSKELHCLHELIWEWQTGNLMAEIAVVISNHEEARELVERL    150
                     |||||||||||||||||||||||||:||:||||||||||||||:|:||.|
RBAM_012920__    101 SELKRVAIFVSKELHCLHELIWEWQSGNMMAEIAVVISNHEEAKEVVEPL    150

BSNT_02204___    151 NIPFHYMKANKDIRAEVEKKQLELLEQYDVDVIVLARYMQILTPDFVSAH    200
                     ||||||||||||||||||::||||||:|.:|||||||||||||.||||||
RBAM_012920__    151 NIPFHYMKANKDIRAEVERRQLELLERYKIDVIVLARYMQILTSDFVSAH    200

BSNT_02204___    201 PNRIINIHHSFLPAFIGANPYKRAYERGVKLIGATSHYVTNDLDEGPIIE    250
                     ||||||||||||||||||||||||||||||||||||||||:|||||||||
RBAM_012920__    201 PNRIINIHHSFLPAFIGANPYKRAYERGVKLIGATSHYVTDDLDEGPIIE    250

BSNT_02204___    251 QDIERVDHRDNAEALKNIGRTIERSVLARAVKWHLEDRVIVHENKTIVFN    300
                     ||||||||||:||.||||||||||||||||||||||||||||.|||||||
RBAM_012920__    251 QDIERVDHRDHAEDLKNIGRTIERSVLARAVKWHLEDRVIVHGNKTIVFN    300


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