Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02204 and RBAM_012920
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:54
# Commandline: needle
# -asequence dna-align/BSNT_02204___purU.1.9828.seq
# -bsequence dna-align/RBAM_012920___purU.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02204___purU-RBAM_012920___purU.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02204___purU-RBAM_012920___purU.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02204___purU
# 2: RBAM_012920___purU
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 905
# Identity: 730/905 (80.7%)
# Similarity: 730/905 (80.7%)
# Gaps: 4/905 ( 0.4%)
# Score: 2926.0
#
#
#=======================================
BSNT_02204___ 1 ATGAAATCATATATGACTCAGCGGTTGGACGAATACCGTGACGGAAATGA 50
|||||.|||||||||||.||||||.||.|.||||||||...|||.|||||
RBAM_012920__ 1 ATGAATTCATATATGACACAGCGGCTGAAAGAATACCGCCGCGGGAATGA 50
BSNT_02204___ 51 GGATAAAGGGCGGCT-CTTGGTCAGCTGCCCCGATCAGCCGGGTATCGTC 99
|||.||||||||.|| ||| ||||||||||||||.||||||||.||.||.
RBAM_012920__ 51 GGAAAAAGGGCGCCTGCTT-GTCAGCTGCCCCGACCAGCCGGGAATTGTA 99
BSNT_02204___ 100 TCTGCAGTTTCTGCGTTTTTATTTGAACACGATGCCAATATTATAGAATC 149
||.||.||.||.||||||||.||||||||.|..||.||.|||||.|||||
RBAM_012920__ 100 TCGGCCGTGTCGGCGTTTTTGTTTGAACATGGCGCAAACATTATTGAATC 149
BSNT_02204___ 150 AAATCAATATACGACAGACCCTGAAGGCGGCCGGTTCTTCCTGAGAATCG 199
|||||||||.|||||.||||||||||||||.|||||.||.||.||.||||
RBAM_012920__ 150 AAATCAATACACGACTGACCCTGAAGGCGGACGGTTTTTTCTTAGGATCG 199
BSNT_02204___ 200 AATTCGACTGCGCGGGCATTCGTGAGAAAAAAGCATCTCTT-CAGGCGGC 248
|||||||||||..|||||||||||||||||||| |...||| |||..|||
RBAM_012920__ 200 AATTCGACTGCAAGGGCATTCGTGAGAAAAAAG-AGGACTTACAGCAGGC 248
BSNT_02204___ 249 GTTTGCCTCTGTAGCGGAAAAATTCGACATGACATGGAGCTTAACTTTGG 298
|||.|||||..|.||..|.|.|||||.|||||||||||||.|..||.|||
RBAM_012920__ 249 GTTCGCCTCAATCGCCCAGACATTCGGCATGACATGGAGCCTGTCTCTGG 298
BSNT_02204___ 299 CAAGTGAATTGAAGCGTGTCGCCATTTTTGTTTCAAAGGAGCTTCATTGC 348
|||||||..|||||||.||.||.||.|||||.||.||||||||.||.|||
RBAM_012920__ 299 CAAGTGAGCTGAAGCGGGTGGCGATCTTTGTATCGAAGGAGCTGCACTGC 348
BSNT_02204___ 349 CTGCATGAGCTGATTTGGGAATGGCAAACCGGCAACCTGATGGCGGAGAT 398
||.|||||.|||||||||||||||||||.||||||..|||||||.||.||
RBAM_012920__ 349 CTTCATGAACTGATTTGGGAATGGCAAAGCGGCAATATGATGGCCGAAAT 398
BSNT_02204___ 399 CGCTGTTGTCATCAGTAACCATGAGGAAGCGAGAGAGCTGGTTGAGCGCC 448
.||.||.||.|||||.|||||.||.||.||.|.|||..||||.||.|..|
RBAM_012920__ 399 TGCGGTCGTTATCAGCAACCACGAAGAGGCCAAAGAAGTGGTCGAACCGC 448
BSNT_02204___ 449 TGAACATTCCATTCCACTATATGAAAGCGAACAAAGACATCAGAGCGGAA 498
||||.|||||.|||||.||.||||||||.||||||||||||.|.||.|||
RBAM_012920__ 449 TGAATATTCCGTTCCATTACATGAAAGCTAACAAAGACATCCGCGCCGAA 498
BSNT_02204___ 499 GTCGAAAAGAAGCAGCTTGAACTGCTGGAGCAGTACGATGTTGATGTCAT 548
||.||...|...||||||||.||||||||||.|||..|..|||||||.||
RBAM_012920__ 499 GTGGAGCGGCGCCAGCTTGAGCTGCTGGAGCGGTATAAGATTGATGTGAT 548
BSNT_02204___ 549 CGTGCTTGCACGCTATATGCAGATTCTAACTCCTGATTTTGTTTCGGCTC 598
|||.|||||.|||||.|||||||||.|.||..||||||||||.||.||.|
RBAM_012920__ 549 CGTTCTTGCCCGCTACATGCAGATTTTGACGTCTGATTTTGTATCTGCCC 598
BSNT_02204___ 599 ATCCGAATCGCATCATCAATATCCACCATTCATTTCTGCCTGCTTTTATC 648
||||||||||.||.||.||.||||||||||||||||||||.||.||||||
RBAM_012920__ 599 ATCCGAATCGGATTATTAACATCCACCATTCATTTCTGCCGGCCTTTATC 648
BSNT_02204___ 649 GGTGCGAATCCGTACAAACGGGCTTACGAGCGCGGCGTGAAACTGATCGG 698
||.||.||||||||.|||||||||||.||||||||.||||||.|.|||||
RBAM_012920__ 649 GGCGCTAATCCGTATAAACGGGCTTATGAGCGCGGAGTGAAATTAATCGG 698
BSNT_02204___ 699 TGCGACATCTCACTATGTGACAAACGATCTTGATGAAGGACCGATCATTG 748
.|||||.||||||||||||||..||||||||||||||||.||.||.||||
RBAM_012920__ 699 CGCGACCTCTCACTATGTGACGGACGATCTTGATGAAGGGCCTATTATTG 748
BSNT_02204___ 749 AACAGGATATTGAGCGTGTGGACCACCGCGATAATGCGGAAGCGCTGAAA 798
|||||||||||||.||.||.||.|||.|.|||.|.||.||.|..|||||.
RBAM_012920__ 749 AACAGGATATTGAACGCGTCGATCACAGAGATCACGCAGAGGATCTGAAG 798
BSNT_02204___ 799 AACATCGGAAGAACAATTGAGCGCAGCGTGCTTGCCCGTGCTGTGAAATG 848
||.|||||.|||||.||||||||.||||||.|.||..|.||.||.|||||
RBAM_012920__ 799 AATATCGGCAGAACGATTGAGCGGAGCGTGTTGGCAAGAGCCGTAAAATG 848
BSNT_02204___ 849 GCATTTGGAAGACCGTGTCATCGTTCATGAAAATAAAACAATCGTCTTTA 898
||||.||||||||||.|||||||||||.|.|||.|||||.|||||.||||
RBAM_012920__ 849 GCATCTGGAAGACCGCGTCATCGTTCACGGAAACAAAACGATCGTATTTA 898
BSNT_02204___ 899 ACTAG 903
|.||.
RBAM_012920__ 899 ATTAA 903
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