Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02203 and RBAM_012910

See DNA alignment / Visit BSNT_02203 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:53
# Commandline: needle
#    -asequence pep-align/BSNT_02203___ykkD.1.9828.seq
#    -bsequence pep-align/RBAM_012910___ykkD.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02203___ykkD-RBAM_012910___ykkD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02203___ykkD-RBAM_012910___ykkD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02203___ykkD
# 2: RBAM_012910___ykkD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 105
# Identity:      86/105 (81.9%)
# Similarity:    92/105 (87.6%)
# Gaps:           1/105 ( 1.0%)
# Score: 444.0
# 
#
#=======================================

BSNT_02203___      1 MLHWISLLCAGCLEMAGVALMNQYAKEKSVKWVLLIIVGFAASFSLLSYA     50
                      :|||||:.||..||.||.||||:.|||.|||:|.||.||||||||||||
RBAM_012910__      1 -MHWISLIAAGLCEMLGVILMNQFQKEKKVKWILFIIAGFAASFSLLSYA     49

BSNT_02203___     51 METIPMGTAYAVWTGIGTAGGALVGILFYKEQKDAKRIFFIALILCSAVG    100
                     ||||.||||||:|||||||||||.|||||.||||||||||||||||:|||
RBAM_012910__     50 METIAMGTAYAIWTGIGTAGGALAGILFYGEQKDAKRIFFIALILCAAVG     99

BSNT_02203___    101 LKILS    105
                     |||||
RBAM_012910__    100 LKILS    104


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