Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02201 and RBAM_012900

See DNA alignment / Visit BSNT_02201 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:53
# Commandline: needle
#    -asequence pep-align/BSNT_02201___ykkC.1.9828.seq
#    -bsequence pep-align/RBAM_012900___ykkC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02201___ykkC-RBAM_012900___ykkC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02201___ykkC-RBAM_012900___ykkC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02201___ykkC
# 2: RBAM_012900___ykkC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 112
# Identity:      89/112 (79.5%)
# Similarity:    97/112 (86.6%)
# Gaps:           0/112 ( 0.0%)
# Score: 435.0
# 
#
#=======================================

BSNT_02201___      1 MKWGLVVLAAVFEVVWVIGLKHADSALTWSGTAIGIIFSFYLLIKATHSL     50
                     |||||||:|||||||||.|||||||||.||||.:|||.|||||||||.||
RBAM_012900__      1 MKWGLVVIAAVFEVVWVTGLKHADSALAWSGTIVGIIVSFYLLIKATDSL     50

BSNT_02201___     51 PVGTVYAVFSGLGTAGTVLSEIVLFHEPVGWPKLLLIGVLLIGVIGLKLV    100
                     |||||||||:||||||||||||:||.|.....|::|||||||||||||||
RBAM_012900__     51 PVGTVYAVFTGLGTAGTVLSEILLFKEQADPVKIVLIGVLLIGVIGLKLV    100

BSNT_02201___    101 TQDETEEKGGEA    112
                     |||:.|.|..:|
RBAM_012900__    101 TQDKPETKEEKA    112


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