Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02201 and RBAM_012900
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:53
# Commandline: needle
# -asequence dna-align/BSNT_02201___ykkC.1.9828.seq
# -bsequence dna-align/RBAM_012900___ykkC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02201___ykkC-RBAM_012900___ykkC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02201___ykkC-RBAM_012900___ykkC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02201___ykkC
# 2: RBAM_012900___ykkC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 353
# Identity: 247/353 (70.0%)
# Similarity: 247/353 (70.0%)
# Gaps: 28/353 ( 7.9%)
# Score: 842.5
#
#
#=======================================
BSNT_02201___ 1 ATGAAATGGGGATTGGTCGTGCTTGCCGCTGTTTTCGAGGTTGTTTGGGT 50
|||||||||||.||.||.||..|.||.||.||.||.||.||.||.|||||
RBAM_012900__ 1 ATGAAATGGGGTTTAGTGGTCATAGCGGCCGTATTTGAAGTGGTATGGGT 50
BSNT_02201___ 51 GATAGGCTTAAAGCACGCTGACTCAGCCTTAACATGGAGCGGCAC---TG 97
.|..|||.|.||.||.|||||.||.||..|..|.||||||||||| ||
RBAM_012900__ 51 CACCGGCCTGAAACATGCTGATTCGGCACTGGCGTGGAGCGGCACGATTG 100
BSNT_02201___ 98 CCATCGGCATCATATTCAGTTTTTATCTTCTAATAAAGGCGACTCACAGT 147
|.||.|||||..|||||||||||||..||||.||||||||..||||.
RBAM_012900__ 101 ---TGGGAATCATCGTCAGTTTTTATCTATTAATCAAGGCGACAGACAGC 147
BSNT_02201___ 148 CTGCCTGTTGGTACCGTGTATGCCGTCTTTAGCGGGCTCGGCACAGCGGG 197
|||||.||.||.||.||.|||||.|||||||.|||.|||||.||||||||
RBAM_012900__ 148 CTGCCCGTAGGAACGGTATATGCGGTCTTTACCGGACTCGGGACAGCGGG 197
BSNT_02201___ 198 AACAGTACTTAGTGAAATCGTTCTGTTTCA----------TGAACCGGTT 237
.||.||.||.|||||||||.|.|| ||||| .||.|||||
RBAM_012900__ 198 CACCGTGCTCAGTGAAATCCTGCT-TTTCAAAGAGCAAGCCGATCCGGT- 245
BSNT_02201___ 238 GGATGGCCGAAGCTATTGTTAATTGGCGTGCTCTTAATCGGTGTAATCGG 287
|||..|..||.|.||.|||||..|..|.||||||||.|||||
RBAM_012900__ 246 --------GAAAATCGTGCTGATCGGCGTTTTGCTGATCGGTGTCATCGG 287
BSNT_02201___ 288 GTTGAAGCTTGTGACACAGGATGAGACAGAGGAAAAAGGAGGCG-AGGCA 336
.||.|||||.||.|||||||||.||.|.|| ||..|||||||.| ||||.
RBAM_012900__ 288 ATTAAAGCTGGTCACACAGGATAAGCCTGA-GACGAAGGAGGAGAAGGCG 336
BSNT_02201___ 337 TAA 339
|||
RBAM_012900__ 337 TAA 339
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