Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02195 and RBAM_012880
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:53
# Commandline: needle
# -asequence pep-align/BSNT_02195___ykhA.1.9828.seq
# -bsequence pep-align/RBAM_012880___ykhA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02195___ykhA-RBAM_012880___ykhA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02195___ykhA-RBAM_012880___ykhA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02195___ykhA
# 2: RBAM_012880___ykhA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 172
# Identity: 158/172 (91.9%)
# Similarity: 166/172 (96.5%)
# Gaps: 0/172 ( 0.0%)
# Score: 821.0
#
#
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BSNT_02195___ 1 METPETRFCKESKVVKTSRVFPLDTNNHNTLFGGKLMSYIDDIASISAAR 50
|:.||:|||||::|||||||||||||||||||||||||||||||||||||
RBAM_012880__ 1 MKLPESRFCKETRVVKTSRVFPLDTNNHNTLFGGKLMSYIDDIASISAAR 50
BSNT_02195___ 51 HCRRETVTASMDSVDFLKPIGQKDSVCLESYVTWVGTSSMEVFVKVIKEH 100
|||.|||||||||||||:||||:|||||||||||||||||||||||||||
RBAM_012880__ 51 HCRCETVTASMDSVDFLRPIGQQDSVCLESYVTWVGTSSMEVFVKVIKEH 100
BSNT_02195___ 101 LMTGERELAATSFLTFVALDSNGKPVPVPRVVPETEEEIMLHNTAVQRAN 150
||||||||||||||||||||||||.|||||:||||||||||||||||||.
RBAM_012880__ 101 LMTGERELAATSFLTFVALDSNGKSVPVPRIVPETEEEIMLHNTAVQRAG 150
BSNT_02195___ 151 ERKNRKKHSQALANALGTDKPW 172
|||||.|||:|||.||||||||
RBAM_012880__ 151 ERKNRLKHSKALAEALGTDKPW 172
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