Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02191 and RBAM_012860
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:53
# Commandline: needle
# -asequence pep-align/BSNT_02191___ykgB.1.9828.seq
# -bsequence pep-align/RBAM_012860___ykgB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02191___ykgB-RBAM_012860___ykgB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02191___ykgB-RBAM_012860___ykgB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02191___ykgB
# 2: RBAM_012860___ykgB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 349
# Identity: 272/349 (77.9%)
# Similarity: 312/349 (89.4%)
# Gaps: 0/349 ( 0.0%)
# Score: 1520.0
#
#
#=======================================
BSNT_02191___ 1 MTKYIGYVGTYTKGGSEGIYSFELDTEKKALSEPKLAAKLGNPTYVAPNK 50
|.|||||.||||||||||||.||||||.|.||.|||||||||||||.||.
RBAM_012860__ 1 MAKYIGYAGTYTKGGSEGIYCFELDTEAKRLSRPKLAAKLGNPTYVTPNS 50
BSNT_02191___ 51 NNTILYSIEKADGQGGVAAYQIDKNSGELTFLNHQLIDGPSPCHVSVDDQ 100
:|::|||||||||:||||||||.:|||||||:|||||:||||||||:||:
RBAM_012860__ 51 DNSMLYSIEKADGKGGVAAYQIHQNSGELTFVNHQLIEGPSPCHVSIDDK 100
BSNT_02191___ 101 NQFVLTANYHSGKVHVFPVQEDGSLQSPVSEAAHTGKGPHERQEKPHTHY 150
:::||||||||||||.|||.|||||:.|.:||||||.||||||||||||:
RBAM_012860__ 101 HEYVLTANYHSGKVHAFPVNEDGSLREPAAEAAHTGTGPHERQEKPHTHF 150
BSNT_02191___ 151 AGFTPEHNYVVAVDLGIDKLYTYKLKDGVLTESGSHSFAPGAGPRHIAFH 200
||:||||||:.|||||.|.||||::|:|.|||..:||||||:|||||.||
RBAM_012860__ 151 AGYTPEHNYIAAVDLGTDTLYTYQMKNGSLTEVKTHSFAPGSGPRHIVFH 200
BSNT_02191___ 201 PKEKYAYVMTELSNEVIALEYNPTAGEFREIQVVSAIPDDFTDNSQGSAI 250
|.|||||||||:||||||||||||.|||||:||:||:|:.|||.||||||
RBAM_012860__ 201 PAEKYAYVMTEISNEVIALEYNPTLGEFRELQVISALPEGFTDKSQGSAI 250
BSNT_02191___ 251 HVTQDGRFVYVANRGHDSIAVFEVNQYSGELAFVERVSTEGNWPRDFVFD 300
.:::||||:|.|||||||||::::|||||||:.:|.|.|||||||||.||
RBAM_012860__ 251 RISKDGRFLYAANRGHDSIAIYKINQYSGELSLIEWVPTEGNWPRDFAFD 300
BSNT_02191___ 301 PTEGFLVASNEETGNLVLFERDKETGRLTLLPSTVSVPYPVCVKFLHQV 349
|:|.||||||||||||||||||.|||:||||.|.:.|||||||.|||||
RBAM_012860__ 301 PSETFLVASNEETGNLVLFERDPETGKLTLLQSDIPVPYPVCVSFLHQV 349
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