Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02191 and RBAM_012860
See
Amino acid alignment /
Visit
BSNT_02191 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:53
# Commandline: needle
# -asequence dna-align/BSNT_02191___ykgB.1.9828.seq
# -bsequence dna-align/RBAM_012860___ykgB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02191___ykgB-RBAM_012860___ykgB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02191___ykgB-RBAM_012860___ykgB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02191___ykgB
# 2: RBAM_012860___ykgB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1066
# Identity: 786/1066 (73.7%)
# Similarity: 786/1066 (73.7%)
# Gaps: 32/1066 ( 3.0%)
# Score: 2770.0
#
#
#=======================================
BSNT_02191___ 1 ATGACAAAATACATAGGATATGTGGGAACATATACAAAAGGCGGAAGCGA 50
|||.|.||.|||||||||||.|.|||||||||||||||||||||||||||
RBAM_012860__ 1 ATGGCTAAGTACATAGGATACGCGGGAACATATACAAAAGGCGGAAGCGA 50
BSNT_02191___ 51 AGGAATTTATTCATTTGAGCTTGATACTGAGAA---AAAAGCACTCAGCG 97
|||.|||||||..|||||.|||||||| |||| |||.| .||||||.
RBAM_012860__ 51 AGGCATTTATTGTTTTGAACTTGATAC--AGAAGCGAAACG-GCTCAGCC 97
BSNT_02191___ 98 AGCCAAAGCTGGCCGCTAAGCTGGGCAACCCGACATATGTGGCGCCGAAT 147
..||.||||||||.||.|||||.||||||||||||||.||..|.||||||
RBAM_012860__ 98 GTCCGAAGCTGGCAGCAAAGCTCGGCAACCCGACATACGTCACTCCGAAT 147
BSNT_02191___ 148 AAAAACAACACCATCCTTTATTCCATCGAAAAAGCAGACGGCCAAGGCGG 197
....|.||||.|||.||.||||||||.|||||.||||||||..|||||||
RBAM_012860__ 148 TCTGATAACAGCATGCTGTATTCCATTGAAAAGGCAGACGGAAAAGGCGG 197
BSNT_02191___ 198 AGTTGCTGCCTATCAAATCGATAAAAACAGCGGCGAATTGACATTTCTGA 247
.||.||.||||||||.||..||.|.||||||||.||.||.||.|||.|||
RBAM_012860__ 198 CGTCGCAGCCTATCAGATTCATCAGAACAGCGGGGAGTTAACTTTTGTGA 247
BSNT_02191___ 248 ATCATCAGTTAATTGATGGCCCTTCGCCATGCCACGTAAGCGTTGATGAT 297
|.||.|||.|.|||||.|||||.||.|||||||||||.|||.||||||||
RBAM_012860__ 248 ACCACCAGCTGATTGAAGGCCCGTCTCCATGCCACGTCAGCATTGATGAT 297
BSNT_02191___ 298 CAAAATCAATTCGTACTGACTGCCAATTATCACAGCGGGAAGGTACACGT 347
.||.||.|||..||..|.||.||.|||||.||||||||.||.||.||||.
RBAM_012860__ 298 AAACATGAATATGTGTTAACCGCTAATTACCACAGCGGAAAAGTGCACGC 347
BSNT_02191___ 348 TTTTCCGGTTCAGGAAGACGGCAGCTTGCAATCACCTGTTTCAGAGGCCG 397
.|||||.||..|.||||||||.||..|||.....||.|.|.|.||.||||
RBAM_012860__ 348 CTTTCCCGTCAATGAAGACGGAAGTCTGCGGGAGCCGGCTGCCGAAGCCG 397
BSNT_02191___ 398 CTCACACAGGAAAAGGGCCGCACGAAAGACAAGAAAAACCGCATACACAC 447
||||.||.||||.|||.||.||.|||||||||||.|||||||||||.||.
RBAM_012860__ 398 CTCATACGGGAACAGGTCCTCATGAAAGACAAGAGAAACCGCATACCCAT 447
BSNT_02191___ 448 TACGCGGGGTTCACACCTGAACACAATTATGTGGTAGCGGTTGATTTAGG 497
|.|||.||.|..||||||||.||.||.||..|.|.|||.||.||||||||
RBAM_012860__ 448 TTCGCAGGCTATACACCTGAGCATAACTACATTGCAGCCGTCGATTTAGG 497
BSNT_02191___ 498 TATAGATAAGCTCTACACCTATAAGCTGAAAGACGGTGTGTTGAC----- 542
.|..||||.|||.||.||.||..|..|||||.|||||..|.|.||
RBAM_012860__ 498 GACGGATACGCTTTATACTTACCAAATGAAAAACGGTTCGCTCACAGAGG 547
BSNT_02191___ 543 TGAATCCGGAAGCCATTCCTTCGCTCCCGGTGCAGGACCTCGCCATATCG 592
|||| ||..||.||.|||||.||.|||.||||.||.|||||.||||
RBAM_012860__ 548 TGAA-----AACTCACTCTTTCGCACCGGGTTCAGGGCCGCGCCACATCG 592
BSNT_02191___ 593 CTTTTCATCCGAAAGAAAAATACGCTTATGTCATGACAGAATTAAGCAAT 642
.|||.||||||...|||||||||||.|||||||||||.|||.|.||.|||
RBAM_012860__ 593 TTTTCCATCCGGCGGAAAAATACGCCTATGTCATGACGGAAATCAGTAAT 642
BSNT_02191___ 643 GAAGTGATTGCGCTTGAATACAACCCGACAGCCGGCGAATTTAGAGAAAT 692
|||||.|||||||||||||||||||||||....||.|||||.|||||..|
RBAM_012860__ 643 GAAGTCATTGCGCTTGAATACAACCCGACCTTAGGTGAATTCAGAGAGCT 692
BSNT_02191___ 693 CCAAGTCGTTTCTGCCATCCCTGATGATTTTACAGATAACAGC-CAGGGA 741
.||.|||.||||.||..|.|||||.|..|||||.||.|| |.| ||.||.
RBAM_012860__ 693 GCAGGTCATTTCCGCTTTGCCTGAAGGCTTTACGGACAA-ATCGCAAGGC 741
BSNT_02191___ 742 AGCGCAAT--ACATGTC-ACGCAGGACGGACGTTTTGTTTATGTCGCAAA 788
|||||.|| .|||.|| | |.|||||..|.|||.||||||..||.||
RBAM_012860__ 742 AGCGCGATCCGCATATCTA---AAGACGGCAGATTTCTTTATGCTGCCAA 788
BSNT_02191___ 789 CCGCGGCCATGACAGTATCGCCGTATTTGAAG-TGAATCAATATTCAGGA 837
||||||.||||||||.||||||.|.|.| ||| |.||.||||||||.||.
RBAM_012860__ 789 CCGCGGACATGACAGCATCGCCATCTAT-AAGATCAACCAATATTCCGGC 837
BSNT_02191___ 838 GAGCTGGCTTTCGTAGAAAGAGTGTCGACAGAAGGAAACTGGCCTCGTGA 887
||..||.||.|..|.|||.|.|||.|||||||||||||||||||.|||||
RBAM_012860__ 838 GAATTGTCTCTTATTGAATGGGTGCCGACAGAAGGAAACTGGCCGCGTGA 887
BSNT_02191___ 888 TTTTGTATTTGACCCAACGGAAGGGTTCCTCGTTGCTTCAAATGAAGAAA 937
|||.|..||||||||..|.||....|||||.||.||.|||||.|||||||
RBAM_012860__ 888 TTTCGCGTTTGACCCTTCTGAGACATTCCTTGTCGCGTCAAACGAAGAAA 937
BSNT_02191___ 938 CAGGCAACCTTGTCTTGTTTGAAAGAGACAAAGAAACCGGCCGATTGACA 987
|.||.||.||.||.|||||||||.|.||....|||||.|||..||||||.
RBAM_012860__ 938 CGGGAAATCTGGTTTTGTTTGAACGTGATCCGGAAACGGGCAAATTGACT 987
BSNT_02191___ 988 CTCCTCCCATC-AACGGTTTCTGTCCCTTACCCGGTTT--GTGTAAAGTT 1034
||.||.|.||| .|| .||.|.||.||.||.|||||.| ||||.| ||
RBAM_012860__ 988 CTGCTTCAATCTGAC-ATTCCGGTTCCGTATCCGGTCTGCGTGTCA--TT 1034
BSNT_02191___ 1035 TTTACATCAAGTATAA 1050
|.|.|||||.||.|||
RBAM_012860__ 1035 TCTGCATCAGGTTTAA 1050
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.