Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02190 and RBAM_012850
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:53
# Commandline: needle
# -asequence pep-align/BSNT_02190___ykfD.1.9828.seq
# -bsequence pep-align/RBAM_012850___ykfD.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02190___ykfD-RBAM_012850___ykfD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02190___ykfD-RBAM_012850___ykfD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02190___ykfD
# 2: RBAM_012850___ykfD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 329
# Identity: 268/329 (81.5%)
# Similarity: 293/329 (89.1%)
# Gaps: 6/329 ( 1.8%)
# Score: 1412.0
#
#
#=======================================
BSNT_02190___ 1 MTPLPLLEVSQLKMHFDAGKKRTVKAVDGVTFQIREGETFGLVGESGCGK 50
||..||||||.||||||||:|:.|||||||:|.|..||||||||||||||
RBAM_012850__ 1 MTASPLLEVSGLKMHFDAGRKKAVKAVDGVSFHINRGETFGLVGESGCGK 50
BSNT_02190___ 51 STLGRVLMRLYQPTEGSVTYRGTNLHALSEKEQFAFNRKLQMIFQDPYAS 100
||||||::|||.||.|||:|.||::|..:.:::..|.|||||||||||||
RBAM_012850__ 51 STLGRVILRLYDPTAGSVSYEGTDIHRAAAEQRSVFFRKLQMIFQDPYAS 100
BSNT_02190___ 101 LNPRMTVREIILEPMEIHNLYNTHKARLLVVDELLEAVGLHPDFGSRYPH 150
||||:||||||:|||||||||||.||||::.|||||||||||||||||||
RBAM_012850__ 101 LNPRLTVREIIMEPMEIHNLYNTRKARLMMADELLEAVGLHPDFGSRYPH 150
BSNT_02190___ 151 EFSGGQRQRIGIARALSLNPEFIVADEPISALDVSVQAQVVNLLKRLQKE 200
||||||||||||||||||:|||||||||||||||||||||||||||||||
RBAM_012850__ 151 EFSGGQRQRIGIARALSLHPEFIVADEPISALDVSVQAQVVNLLKRLQKE 200
BSNT_02190___ 201 KGLTFLFIAHDLSMVKHISDRIGVMYLGHMMEITESGTLYREPLHPYTKA 250
||||||||||||||||||||||||||||.|||||||..||||||||||||
RBAM_012850__ 201 KGLTFLFIAHDLSMVKHISDRIGVMYLGRMMEITESAALYREPLHPYTKA 250
BSNT_02190___ 251 LLSSIPIPDPELEDKRERILLKGELPSPVNPPSGCVFRTRCPEAMPECGE 300
||||||||||.||||||||:||||||||:||||||||||||||||..||:
RBAM_012850__ 251 LLSSIPIPDPLLEDKRERIILKGELPSPLNPPSGCVFRTRCPEAMELCGK 300
BSNT_02190___ 301 SRPQLQEIEPGRFVACHLYRNAETKEKVR 329
..|:|:|::.|||||||||:...
RBAM_012850__ 301 ITPELEEVKAGRFVACHLYKKES------ 323
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