Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02189 and RBAM_012840

See DNA alignment / Visit BSNT_02189 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:53
# Commandline: needle
#    -asequence pep-align/BSNT_02189___ykfC.1.9828.seq
#    -bsequence pep-align/RBAM_012840___ykfC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02189___ykfC-RBAM_012840___ykfC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02189___ykfC-RBAM_012840___ykfC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02189___ykfC
# 2: RBAM_012840___ykfC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 299
# Identity:     181/299 (60.5%)
# Similarity:   219/299 (73.2%)
# Gaps:           3/299 ( 1.0%)
# Score: 960.0
# 
#
#=======================================

BSNT_02189___      1 MMHTVISAVANIWTAPDSPRPSDQFMLQPTVMIRDWLERMTYDERLGLCT     50
                     |...|.:|.||:||.|.|||..|..||:....||.||..|.|:|||.|||
RBAM_012840__      1 MRAAVTAAAANVWTLPSSPRSYDAPMLENPPQIRKWLASMGYEERLQLCT     50

BSNT_02189___     51 DNVIQTQVLFGEKVLVTAEQEEWVSVIVPSQPSRKDPRGYPGWMKKNQLA    100
                     ||::|||.||||:|::..|:.||..|.||.|||.||.|||||||||:||:
RBAM_012840__     51 DNLVQTQALFGEEVIILKEEGEWAFVAVPGQPSNKDVRGYPGWMKKSQLS    100

BSNT_02189___    101 KSMPIHSQHDVMISKPAAFLYKSNEEKEIELSFLTVLPLIAEENGYFKVS    150
                     |.....|...|.|:||.||||.:|.|.::|:||||.|.....|.|:|:|.
RBAM_012840__    101 KDGFHTSSPAVWITKPTAFLYHTNGEPDLEVSFLTRLSASGREKGFFRVV    150

BSNT_02189___    151 TVLGDRFVKQSDAVPVSKQKGTAEDIIQTGAFFLGLPYLWGGISGFGFDC    200
                     |.||:|||.::||......:|.|.|:|:||..||||||||||:|||||||
RBAM_012840__    151 TPLGERFVNEADADECRHTEGRAADVIETGMMFLGLPYLWGGLSGFGFDC    200

BSNT_02189___    201 SGFMYSIFKANGYSIPRDAGDQAKAGKGVPLDDMKAGDLLFFAYEEGKGA    250
                     |||||||||||||::||||.||||||....::|:...|||||||||||||
RBAM_012840__    201 SGFMYSIFKANGYTLPRDAKDQAKAGCSAAVNDILPADLLFFAYEEGKGA    250

BSNT_02189___    251 IHHVGLYVGGGKMLHSPKTGKSIEILTLKDIIYEKELCAVRRCFSE---    296
                     ||||||.:|.|:|||||||||:||:|:|:..:||||||.||||.||   
RBAM_012840__    251 IHHVGLALGDGRMLHSPKTGKTIEVLSLEGTVYEKELCTVRRCISEKGE    299


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