Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02188 and RBAM_012830
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:52
# Commandline: needle
# -asequence pep-align/BSNT_02188___ykfB.1.9828.seq
# -bsequence pep-align/RBAM_012830___ykfB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02188___ykfB-RBAM_012830___ykfB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02188___ykfB-RBAM_012830___ykfB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02188___ykfB
# 2: RBAM_012830___ykfB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 365
# Identity: 278/365 (76.2%)
# Similarity: 316/365 (86.6%)
# Gaps: 6/365 ( 1.6%)
# Score: 1448.0
#
#
#=======================================
BSNT_02188___ 1 MKIIRIETSRIAIPLTKPFKTALRTVYTAESVIVRITYDSGAVGWGEAPP 50
|:|..|:|.|:::||.|||||||||||.||||||::|:|:|..|||||||
RBAM_012830__ 1 MRITDIQTGRMSVPLKKPFKTALRTVYNAESVIVKLTFDNGLTGWGEAPP 50
BSNT_02188___ 51 TLVITGDSMDSIESAIHNVLKPALLGKSLAGYEAILHDIQHLLTGNMSAK 100
|:||||||.|.||||:|:||||||||:.::|.||:|.||..||..|.|||
RBAM_012830__ 51 TVVITGDSADGIESAVHDVLKPALLGRGISGMEAVLFDISRLLERNQSAK 100
BSNT_02188___ 101 AAVEMALYDGWAQMCGLPLYQMLGGYRDTLETDYTVSVNSPEEMAADAEN 150
|||:||:|||||||.|.|||::|||||:|||||:|||||||||||.||:.
RBAM_012830__ 101 AAVDMAVYDGWAQMHGQPLYRLLGGYRNTLETDFTVSVNSPEEMAGDADR 150
BSNT_02188___ 151 YLKQGFQTLKIKVGKDDIATDIARIQEIRKRVGSAVKLRLDANQGWRPKE 200
|:.:||..||||||..||:.|:||||.||.|||..|||||||||||.|||
RBAM_012830__ 151 YVNKGFHILKIKVGIGDISDDVARIQAIRSRVGGNVKLRLDANQGWTPKE 200
BSNT_02188___ 201 AVTAIRKMEDAGLGIELVEQPVHKDDLAGLKKVTDATDTPIMADESVFTP 250
||||||||||||||||||||||||||:||||:||||.|||||||||||||
RBAM_012830__ 201 AVTAIRKMEDAGLGIELVEQPVHKDDIAGLKQVTDAVDTPIMADESVFTP 250
BSNT_02188___ 251 RQAFEVLQTRSADLINIKLMKAGGISGAEKINAMAEACGVECMVGSMIET 300
||||.||||||||||||||||||||..||.||||||.|||||||||||||
RBAM_012830__ 251 RQAFHVLQTRSADLINIKLMKAGGIKQAETINAMAETCGVECMVGSMIET 300
BSNT_02188___ 301 KLGITAAAHFAASKRNITRFDFDAPLMLKTDVFKGGITYSGSTISMPGKP 350
||||||||||||:|||:||||||||||||.|:.:||||||||.|::|.:|
RBAM_012830__ 301 KLGITAAAHFAAAKRNVTRFDFDAPLMLKDDLIQGGITYSGSQIAIPDEP 350
BSNT_02188___ 351 GLGITGTAL------ 359
||||||.::
RBAM_012830__ 351 GLGITGVSIQEGAKR 365
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