Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02184 and RBAM_012800
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:52
# Commandline: needle
# -asequence pep-align/BSNT_02184___dppD.1.9828.seq
# -bsequence pep-align/RBAM_012800___dppD.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02184___dppD-RBAM_012800___dppD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02184___dppD-RBAM_012800___dppD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02184___dppD
# 2: RBAM_012800___dppD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 342
# Identity: 259/342 (75.7%)
# Similarity: 296/342 (86.5%)
# Gaps: 7/342 ( 2.0%)
# Score: 1379.0
#
#
#=======================================
BSNT_02184___ 1 -MEKVLSVQNLHVSFTTYGGTVQAVRGVSFDLYQGETFAIVGESGCGKSV 49
.::|||||||||:|:||||||:||||||||||:||||||||||||||||
RBAM_012800__ 1 MAQQVLSVQNLHVTFSTYGGTVKAVRGVSFDLYKGETFAIVGESGCGKSV 50
BSNT_02184___ 50 TSQSIMGLLPPYSAKVTDGSILFKNIDLCRLSDKEMRGIRGADISMIFQD 99
|||::|||||.:|||:..|||.||..|||::||:|||||||.||||||||
RBAM_012800__ 51 TSQAVMGLLPKHSAKIESGSIQFKQKDLCQMSDREMRGIRGRDISMIFQD 100
BSNT_02184___ 100 PMTALNPTLTVGDQLGEALLRHKKMSKKAARKEVLSMLSLVGIPDPEERL 149
||||||||||:|:||.||||.|:.|::|.|..|||:||.||||||.:.||
RBAM_012800__ 101 PMTALNPTLTIGNQLSEALLEHRAMTRKQAESEVLAMLDLVGIPDSKSRL 150
BSNT_02184___ 150 KQYPHQFSGGMRQRIVIAMALICEPDILIADEPTTALDVTIQAQILELFK 199
||||||.||||||||||||||||||:|:||||||||||||||||||||||
RBAM_012800__ 151 KQYPHQLSGGMRQRIVIAMALICEPEIMIADEPTTALDVTIQAQILELFK 200
BSNT_02184___ 200 EIQRKTNVSVILITHDLGVVAQVADRVAVMYTGKMAEIGTRKDIFYQPQH 249
:|||||.||:||||||||||||.||||||||.||:||||||.||||:|.|
RBAM_012800__ 201 KIQRKTGVSIILITHDLGVVAQTADRVAVMYAGKIAEIGTRHDIFYRPAH 250
BSNT_02184___ 250 PYTKGLLGSVPRLDLDGAELTPIDGTPPDLFSPPPGCPFAARCPNRMVVC 299
|||||||.||||||::.:||:||||||||||.||||||||||||:||:||
RBAM_012800__ 251 PYTKGLLRSVPRLDMEDSELSPIDGTPPDLFDPPPGCPFAARCPDRMIVC 300
BSNT_02184___ 300 DRVYPGQTIRSDSHTVNCWLQDQRAEHAVLSGDAKD------ 335
::|||..|::|.||.|||||||.|||.......|.:
RBAM_012800__ 301 EKVYPATTVKSKSHIVNCWLQDHRAERLKQQLTAAEEKGGLK 342
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