Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02182 and RBAM_012780
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:52
# Commandline: needle
# -asequence pep-align/BSNT_02182___dppB.1.9828.seq
# -bsequence pep-align/RBAM_012780___dppB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02182___dppB-RBAM_012780___dppB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02182___dppB-RBAM_012780___dppB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02182___dppB
# 2: RBAM_012780___dppB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 308
# Identity: 271/308 (88.0%)
# Similarity: 292/308 (94.8%)
# Gaps: 0/308 ( 0.0%)
# Score: 1385.0
#
#
#=======================================
BSNT_02182___ 1 MARYMIKRFWAMAATILVITTLTFVLMKVIPGSPFNEERGTNEAVQKNLE 50
|.||.||||.||..|:|||||||||:||||||||||||||||||||:|||
RBAM_012780__ 1 MLRYFIKRFIAMIMTVLVITTLTFVMMKVIPGSPFNEERGTNEAVQRNLE 50
BSNT_02182___ 51 AYYHLDDPLIFQYIFYLKSIITFDFGPSIKKPSDSVNDMLERGFPVSFEL 100
:||||::|||.||..|||||:||||||||||||||||.||||||||||||
RBAM_012780__ 51 SYYHLNEPLITQYAIYLKSILTFDFGPSIKKPSDSVNAMLERGFPVSFEL 100
BSNT_02182___ 101 GMTAIVIAVISGLVLGVIAALRRNGFLDYAAMSLAVLGISIPNFILATLL 150
|:|||:|||||||.||::|||||.|||||||||||||||||||||:||||
RBAM_012780__ 101 GITAIIIAVISGLALGIMAALRRGGFLDYAAMSLAVLGISIPNFIMATLL 150
BSNT_02182___ 151 IQQFAVNLKLFPAATWTSPIHMVLPTAALAVGPMAIIARLTRSSMVEVLT 200
||||||:|:.|||||||||:||||||.||||||||||||||||||.||||
RBAM_012780__ 151 IQQFAVHLRWFPAATWTSPVHMVLPTVALAVGPMAIIARLTRSSMAEVLT 200
BSNT_02182___ 201 QDYIRTAKAKGLSPFKIIVKHALRNALMPVITVLGTLVASILTGSFVIEK 250
||||||||||||||.||::||||:||||||:||||||.||||||||||||
RBAM_012780__ 201 QDYIRTAKAKGLSPVKIVIKHALKNALMPVVTVLGTLAASILTGSFVIEK 250
BSNT_02182___ 251 IFAIPGMGKYFVESINQRDYPVIMGTTVFYSVILIIMLFLVDLAYGLLDP 300
|||||||||||||||||||||||||||||||||||::|||||||||||||
RBAM_012780__ 251 IFAIPGMGKYFVESINQRDYPVIMGTTVFYSVILIVLLFLVDLAYGLLDP 300
BSNT_02182___ 301 RIKLHKKG 308
||||||||
RBAM_012780__ 301 RIKLHKKG 308
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