Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02182 and RBAM_012780
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:52
# Commandline: needle
# -asequence dna-align/BSNT_02182___dppB.1.9828.seq
# -bsequence dna-align/RBAM_012780___dppB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02182___dppB-RBAM_012780___dppB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02182___dppB-RBAM_012780___dppB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02182___dppB
# 2: RBAM_012780___dppB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 938
# Identity: 727/938 (77.5%)
# Similarity: 727/938 (77.5%)
# Gaps: 22/938 ( 2.3%)
# Score: 2811.0
#
#
#=======================================
BSNT_02182___ 1 TTGGCGCGATACATGATAAAGCGTTTTTGGGCAATGGCAGCTACGATTTT 50
|||..|||.||..|.||.||.||||||...||.|| ||||.|
RBAM_012780__ 1 TTGCTGCGGTATTTTATCAAACGTTTTATCGCCAT---------GATTAT 41
BSNT_02182___ 51 G---------GTGATTACCACCCTGACTTTTGTTCTCATGAAGGTCATTC 91
| ||.||||||||.|||||.|||||..|.|||||.||.||.|
RBAM_012780__ 42 GACCGTCCTCGTCATTACCACTCTGACATTTGTCATGATGAAAGTGATAC 91
BSNT_02182___ 92 CCGGATCTCCTTTTAACGAGGAGAGAGGCACAAATGAAGCCGTTCAAAAA 141
||||.||.|||||||||||.|||.|.||||||||.|||||.||.||...|
RBAM_012780__ 92 CCGGCTCGCCTTTTAACGAAGAGCGGGGCACAAACGAAGCGGTCCAGCGA 141
BSNT_02182___ 142 AATCTCGAAGCCTACTATCA-CTTAGACGATCCTCTCATTTTCCAATACA 190
|||||||||.|||||||.|| ||.| ||||.|||||.||....||||||.
RBAM_012780__ 142 AATCTCGAATCCTACTACCATCTGA-ACGAACCTCTTATCACTCAATACG 190
BSNT_02182___ 191 TTTTCTACTTAAAATCCATCATTACATTCGATTTCGGACCTTCAATTAAA 240
...||||..||||||||||..||||.||.||||||||.||||||||||||
RBAM_012780__ 191 CCATCTATCTAAAATCCATTCTTACCTTTGATTTCGGTCCTTCAATTAAA 240
BSNT_02182___ 241 AAACCGTCGGACAGCGTAAATGATATGCTGGAACGCGGATTTCCCGTTTC 290
||||||||.|||||.|||||.|.||||||.||||||||.|||||.||.||
RBAM_012780__ 241 AAACCGTCAGACAGTGTAAACGCTATGCTCGAACGCGGGTTTCCGGTCTC 290
BSNT_02182___ 291 CTTTGAGCTTGGGATGACAGCGATTGTCATTGCTGTGATTTCTGGGCTGG 340
.||||||||||||||.||.|||||..||||.|||||.|||||.||.||.|
RBAM_012780__ 291 ATTTGAGCTTGGGATAACGGCGATCATCATCGCTGTTATTTCCGGACTCG 340
BSNT_02182___ 341 TGCTGGGCGTAATCGCTGCACTCCGCCGCAATGGGTTTTTGGACTACGCC 390
.|||.|||.||||.||.||.|||.|.|||...||.|||.|.||.||.||.
RBAM_012780__ 341 CGCTCGGCATAATGGCCGCTCTCAGGCGCGGCGGCTTTCTCGATTATGCA 390
BSNT_02182___ 391 GCGATGAGTCTTGCAGTACTCGGCATCTCCATCCCGAATTTTATTCTGGC 440
||.|||||.|||||.||.|||||.||.|||||.||||||||||||.||||
RBAM_012780__ 391 GCCATGAGCCTTGCGGTGCTCGGGATTTCCATTCCGAATTTTATTATGGC 440
BSNT_02182___ 441 AACATTGCTCATTCAGCAATTTGCTGTCAATCTCAAACTATTTCCCGCTG 490
.||..||||.||||||||||||||.||..||||.|.|...|||||.||.|
RBAM_012780__ 441 TACGCTGCTGATTCAGCAATTTGCGGTTCATCTGAGATGGTTTCCGGCAG 490
BSNT_02182___ 491 CCACATGGACGAG-CCCGATTCATATGGTGCTTCCGACCGCAGCGCTTGC 539
|.||.|||||||| |||| ||||.|||||.||.|||||.|..||||||||
RBAM_012780__ 491 CTACCTGGACGAGTCCCG-TTCACATGGTCCTGCCGACTGTTGCGCTTGC 539
BSNT_02182___ 540 TGTAGGGCCAATGGCGATCATTGCCAGGCTGACACGGTCGAGCATGGTCG 589
.||.||.||.|||||.||.||.||.|||||||||.|.||.|||||||.||
RBAM_012780__ 540 CGTCGGTCCCATGGCCATTATCGCGAGGCTGACAAGATCAAGCATGGCCG 589
BSNT_02182___ 590 AAGTTCTGACACAGGATTATATCCGCACAGCAAAAGCAAAAGGGCTTTCT 639
||||.|||||.||||||||.||||||||.|||||||||||.|||||||||
RBAM_012780__ 590 AAGTGCTGACTCAGGATTACATCCGCACGGCAAAAGCAAAGGGGCTTTCT 639
BSNT_02182___ 640 CCGTTCAAAATTATCGTAAAACACGCACTCAGAAATGCACTCATGCCCGT 689
||..||||||||.|..|.|||||||||.|.|.||||||.||.|||||.||
RBAM_012780__ 640 CCCGTCAAAATTGTGATCAAACACGCATTGAAAAATGCTCTTATGCCTGT 689
BSNT_02182___ 690 CATTACCGTCCTGGGCACACTCGTCGCCAGCATCTTAACAGGAAGCTTTG 739
..|.||.||.||.||.||.||.|.|||.||.||.|||||.||.||.||.|
RBAM_012780__ 690 TGTGACAGTACTCGGGACGCTTGCCGCAAGTATTTTAACGGGCAGTTTCG 739
BSNT_02182___ 740 TCATTGAAAAAATCTTTGCCATTCCGGGAATGGGAAAATATTTTGTTGAA 789
||||.||.|||||.||||||||.|||||||||||.||||||||.||.|||
RBAM_012780__ 740 TCATCGAGAAAATTTTTGCCATACCGGGAATGGGCAAATATTTCGTAGAA 789
BSNT_02182___ 790 AGCATTAATCAGCGGGACTACCCCGTGATTATGGGAACGACCGTTTTTTA 839
|||||.||||||||.||.|||||.||.||.||||||||||||||.|||||
RBAM_012780__ 790 AGCATCAATCAGCGAGATTACCCGGTCATCATGGGAACGACCGTATTTTA 839
BSNT_02182___ 840 CAGCGTCATTCTGATTATCATGCTGTTTTTGGTCGATTTGGCCTACGGTC 889
|||.||.||||||||..||.|||||||||||||.||||||||.|||||.|
RBAM_012780__ 840 CAGTGTGATTCTGATCGTCCTGCTGTTTTTGGTTGATTTGGCATACGGCC 889
BSNT_02182___ 890 TCTTAGACCCGCGCATTAAACTGCATAAGAAAGGGTGA 927
|.||||||||||||||.|||||.|||||||||||||||
RBAM_012780__ 890 TGTTAGACCCGCGCATAAAACTTCATAAGAAAGGGTGA 927
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