Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02181 and RBAM_012770

See DNA alignment / Visit BSNT_02181 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:52
# Commandline: needle
#    -asequence pep-align/BSNT_02181___dppA.1.9828.seq
#    -bsequence pep-align/RBAM_012770___dppA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02181___dppA-RBAM_012770___dppA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02181___dppA-RBAM_012770___dppA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02181___dppA
# 2: RBAM_012770___dppA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 274
# Identity:     231/274 (84.3%)
# Similarity:   259/274 (94.5%)
# Gaps:           0/274 ( 0.0%)
# Score: 1233.0
# 
#
#=======================================

BSNT_02181___      1 MKLYMSVDMEGISGLPDDTFVDSGKRNYERGRLIMTEEANYCIAEAFNSG     50
                     ||||:||||||||||||:|||:|...||||||::||||||:|||||||:|
RBAM_012770__      1 MKLYLSVDMEGISGLPDETFVNSRMHNYERGRVLMTEEANWCIAEAFNNG     50

BSNT_02181___     51 CTEVLVNDSHSKMNNLMVEKLHPEADLISGDVKPFSMVEGLDDTFTGALF    100
                     ||||.|||||||||||:.|||||||:||:||||||||::|||::::|.:|
RBAM_012770__     51 CTEVTVNDSHSKMNNLLAEKLHPEAELITGDVKPFSMMQGLDESYSGVMF    100

BSNT_02181___    101 LGYHARASTPGVMSHSMIFGVRHFYINDRPVGELGLNAYVAGYYDVPVLM    150
                     :|||||||.|||||||||||||||||||:||||||||||:||:|||||:|
RBAM_012770__    101 IGYHARASMPGVMSHSMIFGVRHFYINDKPVGELGLNAYLAGFYDVPVIM    150

BSNT_02181___    151 VAGDDRAAKEAEELIPNVTTAAVKQTISRSAVKCLSPAKAGRLLTEKTAF    200
                     .||||.|||||||||||||||||||||||:|||||||.|||||||||||:
RBAM_012770__    151 AAGDDCAAKEAEELIPNVTTAAVKQTISRTAVKCLSPQKAGRLLTEKTAY    200

BSNT_02181___    201 ALQNKDKVKPLTPPDRPVLSIEFANYGQAEWANLMPGTEIKTGTTTVQFQ    250
                     ||:|||||||||||:||||.||||||||||||:|||||||..|||.||||
RBAM_012770__    201 ALKNKDKVKPLTPPERPVLGIEFANYGQAEWAHLMPGTEIIPGTTIVQFQ    250

BSNT_02181___    251 AKDMLEAYQAMLVMTELAMRTSFC    274
                     ||||.||||||||||||||||:||
RBAM_012770__    251 AKDMPEAYQAMLVMTELAMRTTFC    274


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