Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02181 and RBAM_012770

See Amino acid alignment / Visit BSNT_02181 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:52
# Commandline: needle
#    -asequence dna-align/BSNT_02181___dppA.1.9828.seq
#    -bsequence dna-align/RBAM_012770___dppA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02181___dppA-RBAM_012770___dppA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02181___dppA-RBAM_012770___dppA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02181___dppA
# 2: RBAM_012770___dppA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 825
# Identity:     648/825 (78.5%)
# Similarity:   648/825 (78.5%)
# Gaps:           0/825 ( 0.0%)
# Score: 2532.0
# 
#
#=======================================

BSNT_02181___      1 ATGAAATTGTACATGTCAGTAGATATGGAAGGTATTTCGGGTCTTCCGGA     50
                     ||||||.||||..|.||.||.|||||||||||.|||||.||.||.||.||
RBAM_012770__      1 ATGAAACTGTATCTATCTGTGGATATGGAAGGGATTTCCGGACTGCCTGA     50

BSNT_02181___     51 CGATACCTTTGTGGATTCCGGCAAGCGGAATTATGAACGCGGACGGCTTA    100
                     .||.||.|||||..|||||.|||.||..||||||||.|||||..||.||.
RBAM_012770__     51 TGAAACATTTGTCAATTCCCGCATGCACAATTATGAGCGCGGCAGGGTTC    100

BSNT_02181___    101 TCATGACTGAAGAAGCAAACTACTGTATTGCTGAAGCGTTTAACAGCGGG    150
                     |.|||||.|||||||||||||..||.||.||.|||||||||||.|.|||.
RBAM_012770__    101 TGATGACCGAAGAAGCAAACTGGTGCATCGCAGAAGCGTTTAATAACGGA    150

BSNT_02181___    151 TGTACCGAGGTGCTGGTCAATGACAGTCATTCGAAGATGAATAATCTGAT    200
                     ||.||.||.|||...||.||||||||.||.||.|||||||||||||||.|
RBAM_012770__    151 TGCACGGAAGTGACCGTGAATGACAGCCACTCAAAGATGAATAATCTGCT    200

BSNT_02181___    201 GGTTGAAAAGCTTCACCCTGAAGCAGACTTGATTTCTGGTGACGTCAAAC    250
                     .|..|||||.|||||||||||.|||||..|||||.|.||.||.|||||.|
RBAM_012770__    201 CGCGGAAAAACTTCACCCTGAGGCAGAGCTGATTACGGGGGATGTCAAGC    250

BSNT_02181___    251 CATTTTCAATGGTGGAGGGACTGGATGATACGTTTACAGGCGCTTTGTTT    300
                     |.|||||.|||.||.||||.||.|||||..|||.|.||||.|...|||||
RBAM_012770__    251 CGTTTTCCATGATGCAGGGGCTTGATGAATCGTATTCAGGTGTGATGTTT    300

BSNT_02181___    301 CTCGGTTATCATGCGAGAGCCTCGACTCCCGGTGTCATGTCACACAGCAT    350
                     .||||.||||||||||||||.||||..||.||.||.|||||.||||||||
RBAM_012770__    301 ATCGGCTATCATGCGAGAGCGTCGATGCCGGGCGTTATGTCGCACAGCAT    350

BSNT_02181___    351 GATTTTCGGCGTCCGTCATTTTTACATAAACGATCGGCCTGTCGGTGAGC    400
                     |||.|||||||||||.||.|||||||||||.|||..|||.||||||||.|
RBAM_012770__    351 GATATTCGGCGTCCGCCACTTTTACATAAATGATAAGCCGGTCGGTGAAC    400

BSNT_02181___    401 TTGGATTAAATGCATACGTTGCCGGTTATTATGATGTCCCGGTATTAATG    450
                     |.||.||||||||.||..|.|||||.|.|||.|||||||||||..|.|||
RBAM_012770__    401 TGGGGTTAAATGCCTATCTCGCCGGATTTTACGATGTCCCGGTCATCATG    450

BSNT_02181___    451 GTAGCCGGGGATGACCGGGCGGCGAAGGAAGCGGAAGAGCTTATCCCGAA    500
                     |..|||||.|||||..|.||.||.||.||||||||.|||||.||||||||
RBAM_012770__    451 GCTGCCGGAGATGATTGCGCCGCAAAAGAAGCGGAGGAGCTGATCCCGAA    500

BSNT_02181___    501 CGTGACGACAGCCGCAGTCAAACAAACCATTTCAAGATCCGCAGTGAAGT    550
                     .||||||||.|||||.|||||||||||||||||||||.||||.||.||.|
RBAM_012770__    501 TGTGACGACTGCCGCCGTCAAACAAACCATTTCAAGAACCGCGGTCAAAT    550

BSNT_02181___    551 GCTTGTCCCCTGCGAAAGCCGGACGGCTGTTGACAGAAAAAACCGCGTTT    600
                     ||.||||||||...||||||||||||||..||||.||||||||.||.|.|
RBAM_012770__    551 GCCTGTCCCCTCAAAAAGCCGGACGGCTCCTGACGGAAAAAACAGCCTAT    600

BSNT_02181___    601 GCCCTGCAAAACAAGGACAAAGTCAAGCCGCTCACCCCGCCTGACAGGCC    650
                     ||.||..||||.||.||.||.|||||.|||||.||.||||||||.||.||
RBAM_012770__    601 GCGCTCAAAAATAAAGATAAGGTCAAACCGCTGACTCCGCCTGAAAGACC    650

BSNT_02181___    651 GGTTCTGAGCATTGAATTCGCCAATTATGGCCAAGCAGAATGGGCGAATC    700
                     .||..|..||||||||||.|||||.||.||.||.||.||||||||..||.
RBAM_012770__    651 TGTATTAGGCATTGAATTTGCCAACTACGGACAGGCTGAATGGGCCCATT    700

BSNT_02181___    701 TGATGCCGGGAACGGAAATCAAGACGGGAACTACAACCGTTCAATTTCAG    750
                     |.||||||||.||.|||||||...|||||||.||||.|||||||||||||
RBAM_012770__    701 TAATGCCGGGCACAGAAATCATCCCGGGAACGACAATCGTTCAATTTCAG    750

BSNT_02181___    751 GCGAAGGACATGCTTGAAGCCTATCAGGCGATGCTTGTCATGACTGAGCT    800
                     ||.||.|||||||..||||||||||||||.|||||.||||||||.||.||
RBAM_012770__    751 GCAAAAGACATGCCGGAAGCCTATCAGGCCATGCTCGTCATGACAGAACT    800

BSNT_02181___    801 TGCGATGCGGACATCATTCTGCTAA    825
                     .||.|||.|.|||.|||||||.|||
RBAM_012770__    801 CGCCATGAGAACAACATTCTGTTAA    825


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