Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02178 and RBAM_012740
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:51
# Commandline: needle
# -asequence pep-align/BSNT_02178___ykcC.1.9828.seq
# -bsequence pep-align/RBAM_012740___ykcC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02178___ykcC-RBAM_012740___ykcC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02178___ykcC-RBAM_012740___ykcC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02178___ykcC
# 2: RBAM_012740___ykcC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 323
# Identity: 294/323 (91.0%)
# Similarity: 316/323 (97.8%)
# Gaps: 0/323 ( 0.0%)
# Score: 1544.0
#
#
#=======================================
BSNT_02178___ 1 MSRHIQYSIVVPVYNEELVIHETYQRLKEVMDQTKENYELLFVNDGSKDR 50
||||||||||||||||||||..||||||||||||||:|||:|||||||||
RBAM_012740__ 1 MSRHIQYSIVVPVYNEELVIQTTYQRLKEVMDQTKEHYELIFVNDGSKDR 50
BSNT_02178___ 51 SIEILREHSLIDPRVKIIDFSRNFGHQIAITAGMDYAQGNAIVVIDADLQ 100
|||||||||||||||||||||||||||||||||||||:||||.|||||||
RBAM_012740__ 51 SIEILREHSLIDPRVKIIDFSRNFGHQIAITAGMDYAEGNAIAVIDADLQ 100
BSNT_02178___ 101 DPPELILDMIEKWKEGYEVVYAVRTKRKGETFFKKQTAAMFYRLLSGMTD 150
|||||||||||:|||||:||||||||||||||||||||:||||||..:||
RBAM_012740__ 101 DPPELILDMIEQWKEGYDVVYAVRTKRKGETFFKKQTASMFYRLLRSVTD 150
BSNT_02178___ 151 IDIPIDTGDFRLMDRKVCDEMKRLKEKNPFVRGLVSWVGFKQTAVEYVRD 200
||||:|||||||:||||||||||||||||||||||||||||||||||.||
RBAM_012740__ 151 IDIPLDTGDFRLLDRKVCDEMKRLKEKNPFVRGLVSWVGFKQTAVEYERD 200
BSNT_02178___ 201 ERLAGETKYPLKKMLKLSMDGITTFSHKPLKLASYAGILMSGAGFLYMFI 250
|||||||||||||||||||||||||||||||.|||||::|||||||||||
RBAM_012740__ 201 ERLAGETKYPLKKMLKLSMDGITTFSHKPLKAASYAGMIMSGAGFLYMFI 250
BSNT_02178___ 251 VLYLKLFTDSTITGWSSLIVIQLLFSGIVLLILGVIGEYIGRIYDEAKDR 300
|||:||||:||||||||||||||||||||||:||:|||||||||||||||
RBAM_012740__ 251 VLYMKLFTNSTITGWSSLIVIQLLFSGIVLLMLGMIGEYIGRIYDEAKDR 300
BSNT_02178___ 301 PLYIVQKSYGIESKRLYRDQHMS 323
|||||||:||::::::|||||||
RBAM_012740__ 301 PLYIVQKAYGMKNEKIYRDQHMS 323
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