Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02176 and RBAM_012720

See DNA alignment / Visit BSNT_02176 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:51
# Commandline: needle
#    -asequence pep-align/BSNT_02176___ykcA.1.9828.seq
#    -bsequence pep-align/RBAM_012720___ykcA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02176___ykcA-RBAM_012720___ykcA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02176___ykcA-RBAM_012720___ykcA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02176___ykcA
# 2: RBAM_012720___ykcA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 316
# Identity:     261/316 (82.6%)
# Similarity:   285/316 (90.2%)
# Gaps:           0/316 ( 0.0%)
# Score: 1384.0
# 
#
#=======================================

BSNT_02176___      1 MKVNGIHHVSALTADAQKNLDFYKKVLGLKLVKKSVNQDEPTMYHLFYGD     50
                     |||||||||||||||||||||||:.:||||||||||||||||||||||||
RBAM_012720__      1 MKVNGIHHVSALTADAQKNLDFYRNILGLKLVKKSVNQDEPTMYHLFYGD     50

BSNT_02176___     51 EVANPGTELTFFEIPRIAPFHAGTNSISSIGLRVPSTEALHYWKERFEEQ    100
                     |.||||:||||||||||||||||||||||||||||..:||.|||:||||.
RBAM_012720__     51 ETANPGSELTFFEIPRIAPFHAGTNSISSIGLRVPDAQALQYWKKRFEEH    100

BSNT_02176___    101 QVTHSGISKRAGRDIMAFQDHEGQRLVLTADEEGKGYGLPVKQSGIPEEF    150
                     ||.|..|...|||:.:||.|||||||||||||:||..|..|||||||||:
RBAM_012720__    101 QVAHGDIMTIAGRETLAFWDHEGQRLVLTADEKGKDIGEAVKQSGIPEEY    150

BSNT_02176___    151 SFRGLGPVELTVPYAEPTLHVLTNILGFTEISREPVEGQGTAVILESGEG    200
                     |||||||||||||||||||.|||::||||||.:|..|.:||..:||||.|
RBAM_012720__    151 SFRGLGPVELTVPYAEPTLRVLTDVLGFTEIGKETHEDRGTVTVLESGNG    200

BSNT_02176___    201 GAATEIHLIERNDLPRERQGKGSVHHVAFRVRDEEELAGWHRIISREGFS    250
                     ||.||:||||||||||||.||||||||||||::|||||.|||||::||||
RBAM_012720__    201 GARTEVHLIERNDLPRERPGKGSVHHVAFRVQNEEELALWHRIITKEGFS    250

BSNT_02176___    251 NSGIVERYYFKALYFREPNGILFELSTDGPGFMVDENLDELGQTIALPPY    300
                     ||||||||||||||||||||||||||||||||||||..:|||:|:|||||
RBAM_012720__    251 NSGIVERYYFKALYFREPNGILFELSTDGPGFMVDEKPEELGKTVALPPY    300

BSNT_02176___    301 LEHRRAEIEAKLKPIQ    316
                     |||||:||||:|||||
RBAM_012720__    301 LEHRRSEIEARLKPIQ    316


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