Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02169 and RBAM_012670

See DNA alignment / Visit BSNT_02169 in genome browser / Return to Orthologue table

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# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:50
# Commandline: needle
#    -asequence pep-align/BSNT_02169___spoIISB.1.9828.seq
#    -bsequence pep-align/RBAM_012670___spoIISB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02169___spoIISB-RBAM_012670___spoIISB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02169___spoIISB-RBAM_012670___spoIISB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02169___spoIISB
# 2: RBAM_012670___spoIISB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 56
# Identity:      43/56 (76.8%)
# Similarity:    49/56 (87.5%)
# Gaps:           0/56 ( 0.0%)
# Score: 218.0
# 
#
#=======================================

BSNT_02169___      1 MERAFQNRCEPRAAKPFKILKKRSTTSVASYQVSPHTARIFKENERLIDE     50
                     ||:||||....:.|||||:.||||.||:|||||||||||||||||||||:
RBAM_012670__      1 MEQAFQNGQPEQRAKPFKMFKKRSMTSIASYQVSPHTARIFKENERLIDK     50

BSNT_02169___     51 YKRKKA     56
                     ||:|||
RBAM_012670__     51 YKQKKA     56


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