Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02169 and RBAM_012670
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:50
# Commandline: needle
# -asequence dna-align/BSNT_02169___spoIISB.1.9828.seq
# -bsequence dna-align/RBAM_012670___spoIISB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02169___spoIISB-RBAM_012670___spoIISB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02169___spoIISB-RBAM_012670___spoIISB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02169___spoIISB
# 2: RBAM_012670___spoIISB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 175
# Identity: 139/175 (79.4%)
# Similarity: 139/175 (79.4%)
# Gaps: 8/175 ( 4.6%)
# Score: 541.0
#
#
#=======================================
BSNT_02169___ 1 ATGGAACGTGCGTTTCAAAACAGATGCGAGCC----CAGAGCGGCGAAGC 46
|||||.|..||.|||||||||.| || |||| ||.|| .|||||.|
RBAM_012670__ 1 ATGGAGCAGGCATTTCAAAACGG--GC-AGCCGGAACAAAG-AGCGAAAC 46
BSNT_02169___ 47 CGTTTAAAATCCTGAAAAAACGTTCAACCACCAGTGTCGCAAGCTATCAA 96
||||.|||||..|.|||||||||||||..||.|||.|||||||.||.||.
RBAM_012670__ 47 CGTTCAAAATGTTTAAAAAACGTTCAATGACAAGTATCGCAAGTTACCAG 96
BSNT_02169___ 97 GTCAGTCCGCATACAGCAAGAATCTTCAAAGAAAACGAACGGCTGATTGA 146
|||||.||.|||||.||.|||||.||||||||||||||.|||||||||||
RBAM_012670__ 97 GTCAGCCCTCATACCGCCAGAATTTTCAAAGAAAACGAGCGGCTGATTGA 146
BSNT_02169___ 147 CGAGTATAAACGAAAAAAAGCATGA 171
|.|||||||||.|||||||||.|||
RBAM_012670__ 147 CAAGTATAAACAAAAAAAAGCTTGA 171
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