Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02169 and RBAM_012670

See Amino acid alignment / Visit BSNT_02169 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:50
# Commandline: needle
#    -asequence dna-align/BSNT_02169___spoIISB.1.9828.seq
#    -bsequence dna-align/RBAM_012670___spoIISB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02169___spoIISB-RBAM_012670___spoIISB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02169___spoIISB-RBAM_012670___spoIISB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02169___spoIISB
# 2: RBAM_012670___spoIISB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 175
# Identity:     139/175 (79.4%)
# Similarity:   139/175 (79.4%)
# Gaps:           8/175 ( 4.6%)
# Score: 541.0
# 
#
#=======================================

BSNT_02169___      1 ATGGAACGTGCGTTTCAAAACAGATGCGAGCC----CAGAGCGGCGAAGC     46
                     |||||.|..||.|||||||||.|  || ||||    ||.|| .|||||.|
RBAM_012670__      1 ATGGAGCAGGCATTTCAAAACGG--GC-AGCCGGAACAAAG-AGCGAAAC     46

BSNT_02169___     47 CGTTTAAAATCCTGAAAAAACGTTCAACCACCAGTGTCGCAAGCTATCAA     96
                     ||||.|||||..|.|||||||||||||..||.|||.|||||||.||.||.
RBAM_012670__     47 CGTTCAAAATGTTTAAAAAACGTTCAATGACAAGTATCGCAAGTTACCAG     96

BSNT_02169___     97 GTCAGTCCGCATACAGCAAGAATCTTCAAAGAAAACGAACGGCTGATTGA    146
                     |||||.||.|||||.||.|||||.||||||||||||||.|||||||||||
RBAM_012670__     97 GTCAGCCCTCATACCGCCAGAATTTTCAAAGAAAACGAGCGGCTGATTGA    146

BSNT_02169___    147 CGAGTATAAACGAAAAAAAGCATGA    171
                     |.|||||||||.|||||||||.|||
RBAM_012670__    147 CAAGTATAAACAAAAAAAAGCTTGA    171


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