Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02165 and RBAM_012640

See DNA alignment / Visit BSNT_02165 in genome browser / Return to Orthologue table

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# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:50
# Commandline: needle
#    -asequence pep-align/BSNT_02165___xhlA.1.9828.seq
#    -bsequence pep-align/RBAM_012640___xhlA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02165___xhlA-RBAM_012640___xhlA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02165___xhlA-RBAM_012640___xhlA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02165___xhlA
# 2: RBAM_012640___xhlA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 89
# Identity:      64/89 (71.9%)
# Similarity:    73/89 (82.0%)
# Gaps:           2/89 ( 2.2%)
# Score: 323.0
# 
#
#=======================================

BSNT_02165___      1 MQQEADVNVFQQDLLDMKGEHKALEQRVSALERVSDRQDQQIMTLNEKLN     50
                       ...|....|::...:|||.|.|||||:|||||||||||||||||||||
RBAM_012640__      1 --MLLDEQAVQKEFAGIKGEQKVLEQRVAALERVSDRQDQQIMTLNEKLN     48

BSNT_02165___     51 KIEENTTWIKRTITGAIITAVSTGIIGGAIAIMYSLLQH     89
                     ||:||||||||||||||:||:.||:|||||||||:|||.
RBAM_012640__     49 KIDENTTWIKRTITGAIVTAICTGVIGGAIAIMYNLLQK     87


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