Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02162 and RBAM_012620

See DNA alignment / Visit BSNT_02162 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:50
# Commandline: needle
#    -asequence pep-align/BSNT_02162___xkdX.1.9828.seq
#    -bsequence pep-align/RBAM_012620___xkdX.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02162___xkdX-RBAM_012620___xkdX.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02162___xkdX-RBAM_012620___xkdX.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02162___xkdX
# 2: RBAM_012620___xkdX
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 65
# Identity:      32/65 (49.2%)
# Similarity:    43/65 (66.2%)
# Gaps:          11/65 (16.9%)
# Score: 185.0
# 
#
#=======================================

BSNT_02162___      1 ---MNYWVLALYYEWATADMVKQALAYKDCSIEDLAEGVNKKLITADQYK     47
                        :|:||.||:|:|||.:|||||:.|.|||.|||||||..|.||.::::
RBAM_012620__      1 MKRLNFWVYALFYKWATIEMVKQAMGYDDCSAEDLAEGVAAKYITPEEFQ     50

BSNT_02162___     48 EITGKAM--------     54
                     ||||:..        
RBAM_012620__     51 EITGETYENYKNAVS     65


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