Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02162 and RBAM_012620
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:50
# Commandline: needle
# -asequence dna-align/BSNT_02162___xkdX.1.9828.seq
# -bsequence dna-align/RBAM_012620___xkdX.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02162___xkdX-RBAM_012620___xkdX.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02162___xkdX-RBAM_012620___xkdX.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02162___xkdX
# 2: RBAM_012620___xkdX
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 205
# Identity: 120/205 (58.5%)
# Similarity: 120/205 (58.5%)
# Gaps: 47/205 (22.9%)
# Score: 350.5
#
#
#=======================================
BSNT_02162___ 1 ATGAA-----TTA----TTGGGT----GCTTGCCCTCTATTATGAGTGGG 37
||||| ||| |||||| |||| |.|.||||.||||||
RBAM_012620__ 1 ATGAAGAGACTTAACTTTTGGGTTTACGCTT----TGTTTTATAAGTGGG 46
BSNT_02162___ 38 CGACAGCAGATATGGTAAAACAAGC-ATTAGCATATAAAGACTGTTCAAT 86
|.|||..|||.|||||||||||||| ||..|| |||.|.|||||.||...
RBAM_012620__ 47 CCACAATAGAAATGGTAAAACAAGCTATGGGC-TATGATGACTGCTCTGC 95
BSNT_02162___ 87 TGAGGATCTGGCAGAGGGTGTGAACAAAAAGCTGATCACAGCTGACCAGT 136
.||.||||||||.||.||||||..|...|||...|||||..||||..|.|
RBAM_012620__ 96 CGAAGATCTGGCTGAAGGTGTGGCCGCGAAGTATATCACGCCTGAGGAAT 145
BSNT_02162___ 137 ATAAAGAAATTACCGGT-AAAGCCAT--GTAG------------------ 165
.|.|||||||.||.||| ||| ||| |.|.
RBAM_012620__ 146 TTCAAGAAATAACAGGTGAAA--CATACGAAAACTATAAAAATGCTGTGT 193
BSNT_02162___ 165 ----- 165
RBAM_012620__ 194 CATAA 198
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