Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02126 and RBAM_012580

See DNA alignment / Visit BSNT_02126 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:50
# Commandline: needle
#    -asequence pep-align/BSNT_02126___xpf.1.9828.seq
#    -bsequence pep-align/RBAM_012580___xpf.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02126___xpf-RBAM_012580___xpf.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02126___xpf-RBAM_012580___xpf.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02126___xpf
# 2: RBAM_012580___xpf
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 170
# Identity:     129/170 (75.9%)
# Similarity:   151/170 (88.8%)
# Gaps:           1/170 ( 0.6%)
# Score: 665.0
# 
#
#=======================================

BSNT_02126___      1 MQDLLFEYKRTLKQTRIQYKPLAEADESVLSAEELKDKKIIRNMITDLEY     50
                     |:|||||||||||:|:..||.|.||||:||::||||||||||.:|||:||
RBAM_012580__      1 MEDLLFEYKRTLKETKKWYKQLEEADETVLTSEELKDKKIIRTIITDVEY     50

BSNT_02126___     51 VTEWLEKGRQPGIRRAIDRRDAYQRLMIKDPRIIESFSSAMMFEPDGQVS    100
                     |.|||||||||||||||||||||||::||||||||::|.|:||||...|:
RBAM_012580__     51 VIEWLEKGRQPGIRRAIDRRDAYQRMLIKDPRIIETYSQALMFEPSANVT    100

BSNT_02126___    101 EEDRERIREALALLTDREKEMFLLHKVECFSYERIADLLGVKKSTVQTTI    150
                     ||||.|:|:|||:||||||||.||||.|||||||||.||.|||||||||:
RBAM_012580__    101 EEDRIRLRDALAVLTDREKEMLLLHKAECFSYERIAALLNVKKSTVQTTV    150

BSNT_02126___    151 KRASLKMQRQQEEMNRSLA-    169
                     |||.||:|:|||:.|:|.| 
RBAM_012580__    151 KRALLKIQKQQEQRNQSPAS    170


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